Bombarely, Aureliano ORCID: 0000-0001-6257-8914, Moser, Michel, Amrad, Avichai, Bao, Manzhu, Bapaume, Laure, Barry, Cornelius S., Bliek, Mattijs, Boersma, Maaike R., Borghi, Lorenzo ORCID: 0000-0002-9631-9694, Bruggmann, Remy, Bucher, Marcel, D'Agostino, Nunzio ORCID: 0000-0001-9840-3817, Davies, Kevin ORCID: 0000-0001-5652-5015, Druege, Uwe, Dudareva, Natalia ORCID: 0000-0003-0777-7763, Egea-Cortines, Marcos ORCID: 0000-0003-4693-9948, Delledonne, Massimo ORCID: 0000-0002-7100-4581, Fernandez-Pozo, Noe ORCID: 0000-0002-6489-5566, Franken, Philipp, Grandont, Laurie, Heslop-Harrison, J. S., Hintzsche, Jennifer ORCID: 0000-0002-3779-3070, Johns, Mitrick, Koes, Ronald, Lv, Xiaodan, Lyons, Eric ORCID: 0000-0002-3348-8845, Malla, Diwa, Martinoia, Enrico, Mattson, Neil S., Morel, Patrice, Mueller, Lukas A., Muhlemann, Joelle ORCID: 0000-0003-2431-4357, Nouri, Eva, Passeri, Valentina ORCID: 0000-0002-3744-2246, Pezzotti, Mario, Qi, Qinzhou, Reinhardt, Didier ORCID: 0000-0003-3495-6783, Rich, Melanie ORCID: 0000-0001-6109-1290, Richert-Poeggeler, Katja R., Robbins, Tim P., Schatz, Michael C., Schranz, M. Eric, Schuurink, Robert C., Schwarzacher, Trude ORCID: 0000-0001-8310-5489, Spelt, Kees, Tang, Haibao ORCID: 0000-0002-3460-8570, Urbanus, Susan L., Vandenbussche, Michiel, Vijverberg, Kitty, Villarino, Gonzalo H., Warner, Ryan M., Weiss, Julia ORCID: 0000-0003-2432-2613, Yue, Zhen, Zethof, Jan, Quattrocchio, Francesca, Sims, Thomas L. and Kuhlemeier, Cris (2016). Insight into the evolution of the Solanaceae from the parental genomes of Petunia hybrida. Nat. Plants, 2 (6). LONDON: NATURE PUBLISHING GROUP. ISSN 2055-0278

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Abstract

Petunia hybrida is a popular bedding plant that has a long history as a genetic model system. We report the whole-genome sequencing and assembly of inbred derivatives of its two wild parents, P. axillaris N and P. inflata S6. The assemblies include 91.3% and 90.2% coverage of their diploid genomes (1.4 Gb; 2n = 14) containing 32,928 and 36,697 protein-coding genes, respectively. The genomes reveal that the Petunia lineage has experienced at least two rounds of hexaploidization: the older gamma event, which is shared with most Eudicots, and a more recent Solanaceae event that is shared with tomato and other solanaceous species. Transcription factors involved in the shift from bee to moth pollination reside in particularly dynamic regions of the genome, which may have been key to the remarkable diversity of floral colour patterns and pollination systems. The high-quality genome sequences will enhance the value of Petunia as a model system for research on unique biological phenomena such as small RNAs, symbiosis, self-incompatibility and circadian rhythms.

Item Type: Journal Article
Creators:
CreatorsEmailORCIDORCID Put Code
Bombarely, AurelianoUNSPECIFIEDorcid.org/0000-0001-6257-8914UNSPECIFIED
Moser, MichelUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Amrad, AvichaiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Bao, ManzhuUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Bapaume, LaureUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Barry, Cornelius S.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Bliek, MattijsUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Boersma, Maaike R.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Borghi, LorenzoUNSPECIFIEDorcid.org/0000-0002-9631-9694UNSPECIFIED
Bruggmann, RemyUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Bucher, MarcelUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
D'Agostino, NunzioUNSPECIFIEDorcid.org/0000-0001-9840-3817UNSPECIFIED
Davies, KevinUNSPECIFIEDorcid.org/0000-0001-5652-5015UNSPECIFIED
Druege, UweUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Dudareva, NataliaUNSPECIFIEDorcid.org/0000-0003-0777-7763UNSPECIFIED
Egea-Cortines, MarcosUNSPECIFIEDorcid.org/0000-0003-4693-9948UNSPECIFIED
Delledonne, MassimoUNSPECIFIEDorcid.org/0000-0002-7100-4581UNSPECIFIED
Fernandez-Pozo, NoeUNSPECIFIEDorcid.org/0000-0002-6489-5566UNSPECIFIED
Franken, PhilippUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Grandont, LaurieUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Heslop-Harrison, J. S.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hintzsche, JenniferUNSPECIFIEDorcid.org/0000-0002-3779-3070UNSPECIFIED
Johns, MitrickUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Koes, RonaldUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Lv, XiaodanUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Lyons, EricUNSPECIFIEDorcid.org/0000-0002-3348-8845UNSPECIFIED
Malla, DiwaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Martinoia, EnricoUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Mattson, Neil S.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Morel, PatriceUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Mueller, Lukas A.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Muhlemann, JoelleUNSPECIFIEDorcid.org/0000-0003-2431-4357UNSPECIFIED
Nouri, EvaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Passeri, ValentinaUNSPECIFIEDorcid.org/0000-0002-3744-2246UNSPECIFIED
Pezzotti, MarioUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Qi, QinzhouUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Reinhardt, DidierUNSPECIFIEDorcid.org/0000-0003-3495-6783UNSPECIFIED
Rich, MelanieUNSPECIFIEDorcid.org/0000-0001-6109-1290UNSPECIFIED
Richert-Poeggeler, Katja R.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Robbins, Tim P.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schatz, Michael C.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schranz, M. EricUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schuurink, Robert C.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schwarzacher, TrudeUNSPECIFIEDorcid.org/0000-0001-8310-5489UNSPECIFIED
Spelt, KeesUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Tang, HaibaoUNSPECIFIEDorcid.org/0000-0002-3460-8570UNSPECIFIED
Urbanus, Susan L.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Vandenbussche, MichielUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Vijverberg, KittyUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Villarino, Gonzalo H.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Warner, Ryan M.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Weiss, JuliaUNSPECIFIEDorcid.org/0000-0003-2432-2613UNSPECIFIED
Yue, ZhenUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Zethof, JanUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Quattrocchio, FrancescaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Sims, Thomas L.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kuhlemeier, CrisUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
URN: urn:nbn:de:hbz:38-274769
DOI: 10.1038/NPLANTS.2016.74
Journal or Publication Title: Nat. Plants
Volume: 2
Number: 6
Date: 2016
Publisher: NATURE PUBLISHING GROUP
Place of Publication: LONDON
ISSN: 2055-0278
Language: English
Faculty: Unspecified
Divisions: Unspecified
Subjects: no entry
Uncontrolled Keywords:
KeywordsLanguage
POLLINATOR ATTRACTION; TRANSPOSABLE ELEMENTS; SEQUENCE; GENE; SUPPRESSION; GENERATION; EXPRESSION; SYNTHASE; DATABASE; NUMBERMultiple languages
Plant SciencesMultiple languages
Refereed: Yes
URI: http://kups.ub.uni-koeln.de/id/eprint/27476

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