Kohler, Annegret, Kuo, Alan, Nagy, Laszlo G., Morin, Emmanuelle, Barry, Kerrie W., Buscot, Francois ORCID: 0000-0002-2364-0006, Canback, Bjorn, Choi, Cindy, Cichocki, Nicolas, Clum, Alicia, Colpaert, Jan, Copeland, Alex, Costa, Mauricio D., Dore, Jeanne, Floudas, Dimitrios, Gay, Gilles, Girlanda, Mariangela, Henrissat, Bernard ORCID: 0000-0002-3434-8588, Herrmann, Sylvie, Hess, Jaqueline ORCID: 0000-0003-3281-5434, Hogberg, Nils, Johansson, Tomas, Khouja, Hassine-Radhouane, LaButti, Kurt, Lahrmann, Urs, Levasseur, Anthony ORCID: 0000-0003-2989-7539, Lindquist, Erika A., Lipzen, Anna, Marmeisse, Roland ORCID: 0000-0003-1653-3517, Martino, Elena ORCID: 0000-0003-3446-2994, Murat, Claude ORCID: 0000-0003-0685-7307, Ngan, Chew Y., Nehls, Uwe ORCID: 0000-0003-4421-6455, Plett, Jonathan M., Pringle, Anne, Ohm, Robin A., Perotto, Silvia, Peter, Martina ORCID: 0000-0002-6365-6889, Riley, Robert ORCID: 0000-0003-0224-0975, Rineau, Francois, Ruytinx, Joske ORCID: 0000-0001-5835-3704, Salamov, Asaf, Shah, Firoz ORCID: 0000-0001-7833-7832, Sun, Hui, Tarkka, Mika ORCID: 0000-0003-4630-351X, Tritt, Andrew, Veneault-Fourrey, Claire, Zuccaro, Alga ORCID: 0000-0002-8026-0114, Tunlid, Anders, Grigoriev, Igor V., Hibbett, David S. and Martin, Francis (2015). Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. Nature Genet., 47 (4). S. 410 - 417. NEW YORK: NATURE PUBLISHING GROUP. ISSN 1546-1718

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Abstract

To elucidate the genetic bases of mycorrhizal lifestyle evolution, we sequenced new fungal genomes, including 13 ectomycorrhizal (ECM), orchid (ORM) and ericoid (ERM) species, and five saprotrophs, which we analyzed along with other fungal genomes. Ectomycorrhizal fungi have a reduced complement of genes encoding plant cell wall-degrading enzymes (PCWDEs), as compared to their ancestral wood decayers. Nevertheless, they have retained a unique array of PCWDEs, thus suggesting that they possess diverse abilities to decompose lignocellulose. Similar functional categories of nonorthologous genes are induced in symbiosis. Of induced genes, 7-38% are orphan genes, including genes that encode secreted effector-like proteins. Convergent evolution of the mycorrhizal habit in fungi occurred via the repeated evolution of a 'symbiosis toolkit', with reduced numbers of PCWDEs and lineage-specific suites of mycorrhiza-induced genes.

Item Type: Journal Article
Creators:
CreatorsEmailORCIDORCID Put Code
Kohler, AnnegretUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kuo, AlanUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Nagy, Laszlo G.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Morin, EmmanuelleUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Barry, Kerrie W.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Buscot, FrancoisUNSPECIFIEDorcid.org/0000-0002-2364-0006UNSPECIFIED
Canback, BjornUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Choi, CindyUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Cichocki, NicolasUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Clum, AliciaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Colpaert, JanUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Copeland, AlexUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Costa, Mauricio D.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Dore, JeanneUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Floudas, DimitriosUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Gay, GillesUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Girlanda, MariangelaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Henrissat, BernardUNSPECIFIEDorcid.org/0000-0002-3434-8588UNSPECIFIED
Herrmann, SylvieUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hess, JaquelineUNSPECIFIEDorcid.org/0000-0003-3281-5434UNSPECIFIED
Hogberg, NilsUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Johansson, TomasUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Khouja, Hassine-RadhouaneUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
LaButti, KurtUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Lahrmann, UrsUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Levasseur, AnthonyUNSPECIFIEDorcid.org/0000-0003-2989-7539UNSPECIFIED
Lindquist, Erika A.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Lipzen, AnnaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Marmeisse, RolandUNSPECIFIEDorcid.org/0000-0003-1653-3517UNSPECIFIED
Martino, ElenaUNSPECIFIEDorcid.org/0000-0003-3446-2994UNSPECIFIED
Murat, ClaudeUNSPECIFIEDorcid.org/0000-0003-0685-7307UNSPECIFIED
Ngan, Chew Y.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Nehls, UweUNSPECIFIEDorcid.org/0000-0003-4421-6455UNSPECIFIED
Plett, Jonathan M.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Pringle, AnneUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Ohm, Robin A.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Perotto, SilviaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Peter, MartinaUNSPECIFIEDorcid.org/0000-0002-6365-6889UNSPECIFIED
Riley, RobertUNSPECIFIEDorcid.org/0000-0003-0224-0975UNSPECIFIED
Rineau, FrancoisUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Ruytinx, JoskeUNSPECIFIEDorcid.org/0000-0001-5835-3704UNSPECIFIED
Salamov, AsafUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Shah, FirozUNSPECIFIEDorcid.org/0000-0001-7833-7832UNSPECIFIED
Sun, HuiUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Tarkka, MikaUNSPECIFIEDorcid.org/0000-0003-4630-351XUNSPECIFIED
Tritt, AndrewUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Veneault-Fourrey, ClaireUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Zuccaro, AlgaUNSPECIFIEDorcid.org/0000-0002-8026-0114UNSPECIFIED
Tunlid, AndersUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Grigoriev, Igor V.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hibbett, David S.UNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Martin, FrancisUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
URN: urn:nbn:de:hbz:38-409275
DOI: 10.1038/ng.3223
Journal or Publication Title: Nature Genet.
Volume: 47
Number: 4
Page Range: S. 410 - 417
Date: 2015
Publisher: NATURE PUBLISHING GROUP
Place of Publication: NEW YORK
ISSN: 1546-1718
Language: English
Faculty: Faculty of Mathematics and Natural Sciences
Divisions: Faculty of Mathematics and Natural Sciences > Department of Biology > Botanical Institute
Subjects: no entry
Uncontrolled Keywords:
KeywordsLanguage
LACCARIA-BICOLOR; CARBON; GENOME; PROTEIN; INSIGHTS; ORIGINS; LITTER; ROOTS; FUNGIMultiple languages
Genetics & HeredityMultiple languages
Refereed: Yes
URI: http://kups.ub.uni-koeln.de/id/eprint/40927

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