Universität zu Köln

2022

Schlautmann, Lena P., Lackmann, Jan-Wilm ORCID: 0000-0001-8182-8034, Altmueller, Janine, Dieterich, Christoph ORCID: 0000-0001-9468-6311, Boehm, Volker ORCID: 0000-0001-7588-9842 and Gehring, Niels H. (2022). Exon junction complex-associated multi-adapter RNPS1 nucleates splicing regulatory complexes to maintain transcriptome surveillance. Nucleic Acids Res., 50 (10). S. 5899 - 5919. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962

Wallmeroth, Damaris ORCID: 0000-0003-3437-4070, Lackmann, Jan-Wilm ORCID: 0000-0001-8182-8034, Kueckelmann, Sabrina ORCID: 0000-0001-8070-8823, Altmueller, Janine, Dieterich, Christoph ORCID: 0000-0001-9468-6311, Boehm, Volker ORCID: 0000-0001-7588-9842 and Gehring, Niels H. (2022). Human UPF3A and UPF3B enable fault-tolerant activation of nonsense-mediated mRNA decay. Embo J., 41 (10). HOBOKEN: WILEY. ISSN 1460-2075

2021

Boehm, Volker ORCID: 0000-0001-7588-9842, Kueckelmann, Sabrina ORCID: 0000-0001-8070-8823, Gerbracht, Jennifer, V, Kallabis, Sebastian ORCID: 0000-0003-1580-7109, Britto-Borges, Thiago, Altmueller, Janine, Krueger, Marcus, Dieterich, Christoph and Gehring, Niels H. (2021). SMG5-SMG7 authorize nonsense-mediated mRNA decay by enabling SMG6 endonucleolytic activity. Nat. Commun., 12 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723

Erkelenz, Steffen ORCID: 0000-0003-4763-1240, Stankovic, Dimitrije, Mundorf, Juliane, Bresser, Tina ORCID: 0000-0002-3827-6403, Claudius, Ann-Katrin, Boehm, Volker ORCID: 0000-0001-7588-9842, Gehring, Niels H. and Uhlirova, Mirka (2021). Ecd promotes U5 snRNP maturation and Prp8 stability. Nucleic Acids Res., 49 (3). S. 1688 - 1708. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962

Wang, Qi ORCID: 0000-0002-7827-4808, Boenigk, Sven, Boehm, Volker ORCID: 0000-0001-7588-9842, Gehring, Niels, Altmueller, Janine and Dieterich, Christoph ORCID: 0000-0001-9468-6311 (2021). Single-cell transcriptome sequencing on the Nanopore platform with ScNapBar. RNA, 27 (7). S. 763 - 771. COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 1469-9001

2020

Gerbracht, Jennifer, V, Boehm, Volker, Britto-Borges, Thiago, Kallabis, Sebastian, Wiederstein, Janica L., Ciriello, Simona, Aschemeier, Dominik U., Krueger, Marcus, Frese, Christian K., Altmueller, Janine, Dieterich, Christoph and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2020). CASC3 promotes transcriptome-wide activation of nonsense-mediated decay by the exon junction complex. Nucleic Acids Res., 48 (15). S. 8626 - 8645. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962

2019

Voigt, Franka, Gerbracht, Jennifer V. ORCID: 0000-0002-3377-4649, Boehm, Volker ORCID: 0000-0001-7588-9842, Horvathova, Ivana, Eglinger, Jan ORCID: 0000-0001-7234-1435, Chao, Jeffrey A. and Gehring, Niels H. (2019). Detection and quantification of RNA decay intermediates using XRN1-resistant reporter transcripts. Nat. Protoc., 14 (5). S. 1603 - 1634. LONDON: NATURE PUBLISHING GROUP. ISSN 1750-2799

2018

Boehm, Volker ORCID: 0000-0001-7588-9842, Britto-Borges, Thiago, Steckelberg, Anna-Lena ORCID: 0000-0001-7988-9946, Singh, Kusum K., Gerbracht, Jennifer V. ORCID: 0000-0002-3377-4649, Gueney, Elif, Blazquez, Lorea, Altmueller, Janine, Dieterich, Christoph and Gehring, Niels H. (2018). Exon Junction Complexes Suppress Spurious Splice Sites to Safeguard Transcriptome Integrity. Mol. Cell, 72 (3). S. 482 - 503. CAMBRIDGE: CELL PRESS. ISSN 1097-4164

2017

Gerbracht, Jennifer V. ORCID: 0000-0002-3377-4649, Boehm, Volker ORCID: 0000-0001-7588-9842 and Gehring, Niels H. (2017). Plasmid transfection influences the readout of nonsense-mediated mRNA decay reporter assays in human cells. Sci Rep, 7. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Ottens, Franziska ORCID: 0000-0002-0353-2649, Boehm, Volker ORCID: 0000-0001-7588-9842, Sibley, Christopher R., Ule, Jernej ORCID: 0000-0002-2452-4277 and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2017). Transcript-specific characteristics determine the contribution of endo- and exonucleolytic decay pathways during the degradation of nonsense-mediated decay substrates. RNA, 23 (8). S. 1224 - 1237. COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 1469-9001

2016

Boehm, Volker ORCID: 0000-0001-7588-9842 and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2016). Exon Junction Complexes: Supervising the Gene Expression Assembly Line. Trends Genet., 32 (11). S. 724 - 736. LONDON: ELSEVIER SCIENCE LONDON. ISSN 1362-4555

Boehm, Volker ORCID: 0000-0001-7588-9842, Gerbracht, Jennifer V. ORCID: 0000-0002-3377-4649, Marx, Marie-Charlotte and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2016). Interrogating the degradation pathways of unstable mRNAs with XRN1-resistant sequences. Nat. Commun., 7. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

2015

Fatscher, Tobias, Boehm, Volker ORCID: 0000-0001-7588-9842 and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2015). Mechanism, factors, and physiological role of nonsense-mediated mRNA decay. Cell. Mol. Life Sci., 72 (23). S. 4523 - 4545. BASEL: SPRINGER BASEL AG. ISSN 1420-9071

2014

Boehm, Volker ORCID: 0000-0001-7588-9842, Haberman, Nejc ORCID: 0000-0001-9247-4139, Ottens, Franziska ORCID: 0000-0002-0353-2649, Ule, Jernej ORCID: 0000-0002-2452-4277 and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2014). 3 ' UTR Length and Messenger Ribonucleoprotein Composition Determine Endocleavage Efficiencies at Termination Codons. Cell Reports, 9 (2). S. 555 - 569. CAMBRIDGE: CELL PRESS. ISSN 2211-1247

Clerici, Marcello, Deniaud, Aurelien, Boehm, Volker ORCID: 0000-0001-7588-9842, Gehring, Niels H. ORCID: 0000-0001-7792-1164, Schaffitzel, Christiane and Cusack, Stephen ORCID: 0000-0002-9324-0796 (2014). Structural and functional analysis of the three MIF4G domains of nonsense-mediated decay factor UPF2. Nucleic Acids Res., 42 (4). S. 2673 - 2687. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962

Fatscher, Tobias, Boehm, Volker ORCID: 0000-0001-7588-9842, Weiche, Benjamin and Gehring, Niels H. ORCID: 0000-0001-7792-1164 (2014). The interaction of cytoplasmic poly(A)-binding protein with eukaryotic initiation factor 4G suppresses nonsense-mediated mRNA decay. RNA, 20 (10). S. 1579 - 1593. COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 1469-9001