Universität zu Köln

Journal Article

Bai, Yang ORCID: 0000-0003-2652-7022, Mueller, Daniel B., Srinivas, Girish, Garrido-Oter, Ruben, Potthoff, Eva, Rott, Matthias, Dombrowski, Nina ORCID: 0000-0003-1917-2577, Muench, Philipp C., Spaepen, Stijn ORCID: 0000-0001-5465-8287, Remus-Emsermann, Mitja, Huettel, Bruno, McHardy, Alice C., Vorholt, Julia A. and Schulze-Lefert, Paul (2015). Functional overlap of the Arabidopsis leaf and root microbiota. Nature, 528 (7582). S. 364 - 383. BERLIN: NATURE RESEARCH. ISSN 1476-4687

Bourceret, Amelia, Guan, Rui ORCID: 0000-0003-0862-2368, Dorau, Kristof, Mansfeldt, Tim, Omidbakhshfard, Amin, Medeiros, David B., Fernie, Alisdair R., Hofmann, Joerg ORCID: 0000-0001-7387-1569, Sonnewald, Uwe ORCID: 0000-0003-1835-5339, Mayer, Jochen, Gerlach, Nina, Bucher, Marcel ORCID: 0000-0003-1680-9413, Garrido-Oter, Ruben, Spaepen, Stijn ORCID: 0000-0001-5465-8287 and Schulze-Lefert, Paul (2022). Maize Field Study Reveals Covaried Microbiota and Metabolic Changes in Roots over Plant Growth. mBio, 13 (2). WASHINGTON: AMER SOC MICROBIOLOGY. ISSN 2150-7511

Bulgarelli, Davide ORCID: 0000-0002-2020-6642, Garrido-Oter, Ruben, Muench, Philipp C., Weiman, Aaron, Droege, Johannes, Pan, Yao, McHardy, Alice C. and Schulze-Lefert, Paul (2015). Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley. Cell Host Microbe, 17 (3). S. 392 - 404. CAMBRIDGE: CELL PRESS. ISSN 1934-6069

Bulgarelli, Davide ORCID: 0000-0002-2020-6642, Garrido-Oter, Ruben, Muench, Philipp C., Weiman, Aaron, Droege, Johannes, Pan, Yao, McHardy, Alice C. and Schulze-Lefert, Paul (2015). Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley. Cell Host Microbe, 17 (3). S. 392 - 404. CAMBRIDGE: CELL PRESS. ISSN 1934-6069

Dombrowski, Nina ORCID: 0000-0003-1917-2577, Schlaeppi, Klaus ORCID: 0000-0003-3620-0875, Agler, Matthew T., Hacquard, Stephane, Kemen, Eric ORCID: 0000-0002-7924-116X, Garrido-Oter, Ruben, Wunder, Joerg, Coupland, George ORCID: 0000-0001-6988-4172 and Schulze-Lefert, Paul (2017). Root microbiota dynamics of perennial Arabis alpina are dependent on soil residence time but independent of flowering time. ISME J., 11 (1). S. 43 - 56. LONDON: NATURE PUBLISHING GROUP. ISSN 1751-7370

Duran, Paloma, Thiergart, Thorsten, Garrido-Oter, Ruben, Agler, Matthew, Kemen, Eric ORCID: 0000-0002-7924-116X, Schulze-Lefert, Paul and Hacquard, Stephane (2018). Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival. Cell, 175 (4). S. 973 - 998. CAMBRIDGE: CELL PRESS. ISSN 1097-4172

Hacquard, Stephane, Kracher, Barbara, Hiruma, Kei ORCID: 0000-0002-5487-5414, Muech, Philipp C., Garrido-Oter, Ruben, Thon, Michael R., Weimann, Aaron, Damm, Ulrike, Dallery, Jean-Felix ORCID: 0000-0002-0771-9611, Hainaut, Matthieu, Henrissat, Bernard ORCID: 0000-0002-3434-8588, Lespinet, Olivier, Sacristan, Soledad, van Themaat, Emiel Ver Loren, Kemen, Eric ORCID: 0000-0002-7924-116X, McHardy, Alice C., Schulze-Lefert, Paul and O'Connell, Richard J. (2016). Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. Nat. Commun., 7. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Harbort, Christopher J., Hashimoto, Masayoshi, Inoue, Haruhiko, Niu, Yulong, Guan, Rui, Rombola, Adamo D., Kopriva, Stanislav, Voges, Mathias J. E. E. E., Sattely, Elizabeth S., Garrido-Oter, Ruben and Schulze-Lefert, Paul (2020). Root-Secreted Coumarins and the Microbiota Interact to Improve Iron Nutrition in Arabidopsis. Cell Host Microbe, 28 (6). S. 825 - 844. CAMBRIDGE: CELL PRESS. ISSN 1934-6069

Ma, Ka-Wai, Niu, Yulong, Jia, Yong, Ordon, Jana ORCID: 0000-0001-8764-6418, Copeland, Charles ORCID: 0000-0001-8535-8615, Emonet, Aurelia, Geldner, Niko ORCID: 0000-0002-2300-9644, Guan, Rui, Stolze, Sara Christina ORCID: 0000-0002-1421-9703, Nakagami, Hirofumi ORCID: 0000-0003-2569-7062, Garrido-Oter, Ruben and Schulze-Lefert, Paul (2021). Coordination of microbe-host homeostasis by crosstalk with plant innate immunity. Nat. Plants, 7 (6). S. 814 - 846. BERLIN: NATURE RESEARCH. ISSN 2055-0278

Mahdi, Lisa K., Miyauchi, Shingo, Uhlmann, Charles ORCID: 0000-0002-6749-4805, Garrido-Oter, Ruben ORCID: 0000-0003-1769-892X, Langen, Gregor ORCID: 0000-0002-8321-1756, Wawra, Stephan, Niu, Yulong, Guan, Rui, Robertson-Albertyn, Senga, Bulgarelli, Davide ORCID: 0000-0002-2020-6642, Parker, Jane E. and Zuccaro, Alga ORCID: 0000-0002-8026-0114 (2022). The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley. ISME J., 16 (3). S. 876 - 890. LONDON: SPRINGERNATURE. ISSN 1751-7370

Robbins, Chanz ORCID: 0000-0002-8044-4941, Thiergart, Thorsten, Hacquard, Stephane, Garrido-Oter, Ruben, Gans, Wolfgang, Peiter, Edgar ORCID: 0000-0002-9104-3238, Schulze-Lefert, Paul and Spaepen, Stijn ORCID: 0000-0001-5465-8287 (2018). Root-Associated Bacterial and Fungal Community Profiles of Arabidopsis thaliana Are Robust Across Contrasting Soil P Levels. Phytobiomes J., 2 (1). S. 24 - 35. ST PAUL: AMER PHYTOPATHOLOGICAL SOC. ISSN 2471-2906

Shimasaki, Tomohisa, Masuda, Sachiko, Garrido-Oter, Ruben, Kawasaki, Takashi, Aoki, Yuichi, Shibata, Arisa, Suda, Wataru, Shirasu, Ken ORCID: 0000-0002-0349-3870, Yazaki, Kazufumi, Nakano, Ryohei Thomas ORCID: 0000-0001-5973-2300 and Sugiyama, Akifumi (2021). Tobacco Root Endophytic Arthrobacter Harbors Genomic Features Enabling the Catabolism of Host-Specific Plant Specialized Metabolites. mBio, 12 (3). WASHINGTON: AMER SOC MICROBIOLOGY. ISSN 2150-7511

Thiergart, Thorsten, Duran, Paloma, Ellis, Thomas, Vannier, Nathan, Garrido-Oter, Ruben, Kemen, Eric ORCID: 0000-0002-7924-116X, Roux, Fabrice, Alonso-Blanco, Carlos ORCID: 0000-0002-4738-5556, Agren, Jon ORCID: 0000-0001-9573-2463, Schulze-Lefert, Paul and Hacquard, Stephane (2020). Root microbiota assembly and adaptive differentiation among European Arabidopsis populations. Nat. Ecol. Evol., 4 (1). S. 122 - 143. LONDON: NATURE PUBLISHING GROUP. ISSN 2397-334X

Zgadzaj, Rafal, Garrido-Oter, Ruben, Jensen, Dorthe Bodker, Koprivova, Anna, Schulze-Lefert, Paul and Radutoiu, Simona (2016). Root nodule symbiosis in Lotus japonicus drives the establishment of distinctive rhizosphere, root, and nodule bacterial communities. Proc. Natl. Acad. Sci. U. S. A., 113 (49). S. E7996 - 10. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Zhang, Jingying, Liu, Yong-Xin ORCID: 0000-0003-1832-9835, Guo, Xiaoxuan, Qin, Yuan, Garrido-Oter, Ruben ORCID: 0000-0003-1769-892X, Schulze-Lefert, Paul and Bai, Yang (2021). High-throughput cultivation and identification of bacteria from the plant root microbiota. Nat. Protoc., 16 (2). BERLIN: NATURE RESEARCH. ISSN 1750-2799