Universität zu Köln

Journal Article

Albin, Jan, Fahrig, Luca, Siemanowski, Janna, Rehkaemper, Jan, Gebauer, Florian, Zander, Thomas, Buettner, Reinhard, Bruns, Christiane Josephine, Schroeder, Wolfgang, Alakus, Hakan, Hieggelke, Lena and Quaas, Alexander . FGFR2-amplified tumor clones are markedly heterogeneously distributed in carcinomas of the upper gastrointestinal tract. J. Cancer Res. Clin. Oncol.. NEW YORK: SPRINGER. ISSN 1432-1335

Alidousty, Christina, Duerbaum, Nicolai, Wagener-Ryczek, Svenja, Baar, Till ORCID: 0000-0002-6744-1463, Martelotto, Luciano G., Heydt, Carina, Siemanowski, Janna, Holz, Barbara, Binot, Elke, Fassunke, Jana, Merkelbach-Bruse, Sabine, Wolf, Juergen, Kron, Anna, Buettner, Reinhard and Schultheis, Anne M. . Prevalence and potential biological role of TERT amplifications in ALK translocated adenocarcinoma of the lung. Histopathology. HOBOKEN: WILEY. ISSN 1365-2559

Depoilly, Thomas, Garinet, Simon, Kempen, Leon C. van, Schuuring, Ed ORCID: 0000-0003-3655-143X, Clave, Sergi, Bellosillo, Beatriz, Ercolani, Cristiana, Buglioni, Simonetta, Siemanowski, Janna, Merkelbach-Bruse, Sabine, Tischler, Verena, Demes, Melanie-Christin, Paridaens, Henry, Sibille, Catherine, Montpreville, Vincent Thomas de, Rouleau, Etienne, Bartczak, Artur, Pasieka-Lis, Monika, Wei, Ryan Yee, Chuah, Khoon Leong, Barbosa, Marta, Quintana, Carlos, Biscuola, Michele, Delgado-Garcia, Mercedes, Vacirca, Davide, Rappa, Alessandra, Cashmore, Matthew, Smith, Matthew, Jasionowicz, Piotr, Meeney, Adam, Desmeules, Patrice, Terris, Benoit and Mansuet-Lupo, Audrey (2022). Multicenter Evaluation of the Idylla GeneFusion in Non-Small-Cell Lung Cancer. J. Mol. Diagn., 24 (9). S. 1021 - 1031. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1943-7811

Gamerith, Gabriele, Kloppenburg, Marcel, Mildner, Finn, Amann, Arno, Merkelbach-Bruse, Sabine, Heydt, Carina, Siemanowski, Janna, Buettner, Reinhard, Fiegl, Michael, Manzl, Claudia and Pall, Georg (2022). Molecular Characteristics of Radon Associated Lung Cancer Highlights MET Alterations. Cancers, 14 (20). BASEL: MDPI. ISSN 2072-6694

Hakeemi, Muhammad Salim, Ansari, Salim, Teuscher, Matthias, Weisskopf, Matthias, Grossmann, Daniela, Kessel, Tobias, Doenitz, Juergen, Siemanowski, Janna, Wan, Xuebin, Schultheis, Dorothea, Frasch, Manfred, Roth, Siegfried, Schoppmeier, Michael, Klingler, Martin and Bucher, Gregor (2022). Screens in fly and beetle reveal vastly divergent gene sets required for developmental processes. BMC Biol., 20 (1). LONDON: BMC. ISSN 1741-7007

Herndon, Nicolae, Shelton, Jennifer M., Gerischer, Lizzy, Ioannidis, Panos, Ninova, Maria ORCID: 0000-0001-5051-5502, Doenitz, Juergen, Waterhouse, Robert M., Liang, Chun Yan, Damm, Carsten, Siemanowski, Janna, Kitzmann, Peter, Ulrich, Julia, Dippel, Stefan, Oberhofer, Georg ORCID: 0000-0003-0930-1996, Hu, Yonggang, Schwirz, Jonas, Schacht, Magdalena Ines, Lehmann, Sabrina, Montino, Alice, Posnien, Nico, Gurska, Daniela ORCID: 0000-0001-7756-5331, Horn, Thorsten, Seibert, Jan, Jentzsch, Iris M. Vargas, Panfilio, Kristen A., Li, Jianwei, Wimmer, Ernst A. ORCID: 0000-0002-2480-2804, Stappert, Dominik, Roth, Siegfried, Schroeder, Reinhard, Park, Yoonseong, Schoppmeier, Michael, Chung, Ho-Ryun, Klingler, Martin, Kittelmann, Sebastian ORCID: 0000-0002-2234-4539, Friedrich, Markus, Chen, Runhua, Altincicek, Boran, Vilcinskas, Andreas, Zdobnov, Evgeny M., Griffiths-Jones, Sam, Ronshaugen, Matthew, Stanke, Mario, Brown, Sue J. and Bucher, Gregor (2020). Enhanced genome assembly and a new official gene set for Tribolium castaneum. BMC Genomics, 21 (1). LONDON: BMC. ISSN 1471-2164

Heydt, Carina, Woelwer, Christina B., Camacho, Oscar Velazquez, Wagener-Ryczek, Svenja, Pappesch, Roberto, Siemanowski, Janna, Rehker, Jan, Haller, Florian, Agaimy, Abbas, Worm, Karl, Herold, Thomas, Pfarr, Nicole, Weichert, Wilko, Kirchner, Thomas, Jung, Andreas, Kumbrink, Joerg, Goering, Wolfgang, Esposito, Irene, Buettner, Reinhard, Hillmer, Axel M. and Merkelbach-Bruse, Sabine (2021). Detection of gene fusions using targeted next-generation sequencing: a comparative evaluation. BMC Med. Genomics, 14 (1). LONDON: BMC. ISSN 1755-8794

Malapelle, Umberto ORCID: 0000-0003-3211-9957, Pepe, Francesco, Pisapia, Pasquale ORCID: 0000-0002-6429-0620, Altimari, Annalisa, Bellevicine, Claudio, Brunnstrom, Hans ORCID: 0000-0001-7402-138X, Bruno, Rossella, Buttner, Reinhard, Cirnes, Luis, De Andrea, Carlos E., de Biase, Dario ORCID: 0000-0002-0609-8817, Dumur, Catherine, I, Lindquist, Kajsa Ericson, Fontanini, Gabriella, Gautiero, Eugenio, Gentien, David, Hofman, Paul, Hofman, Veronique, Iaccarino, Antonino, Dolores Lozano, Maria, Mayo-de-Las-Casas, Clara, Merkelbach-Bruse, Sabine, Pagni, Fabio, Roman, Ruth, Schmitt, Fernando C., Siemanowski, Janna, Roy-Chowdhuri, Sinchita, Tallini, Giovanni ORCID: 0000-0003-0113-6682, Tresserra, Francesc, Vander Borght, Sara, Vielh, Philippe, Vigliar, Elena, Vita, Giulia Anna Carmen, Weynand, Birgit, Rosell, Rafael, Vila, Miguel Angel Molina and Troncone, Giancarlo . Reference standards for gene fusion molecular assays on cytological samples: an international validation study. J. Clin. Pathol.. LONDON: BMJ PUBLISHING GROUP. ISSN 1472-4146

Malapelle, Umberto, Pepe, Francesco, Pisapia, Pasquale, Sgariglia, Roberta, Nacchio, Mariantonia, Barberis, Massimo, Bilh, Michel, Bubendorf, Lukas, Buettner, Reinhard, Cabibi, Daniela, Castiglia, Marta, De Andrea, Carlos E., de Biase, Dario ORCID: 0000-0002-0609-8817, Dumur, Catherine, I, Fontanini, Gabriella, Freire, Javier, Gristina, Valerio, Hofman, Paul, Ilie, Marius, Lozano, Maria Dolores, Merkelbach-Bruse, Sabine, Pappesch, Roberto, Pelusi, Natalie, Roma, Gianluca, Russo, Antonio, Savic, Spasenija, Siemanowski, Janna, Tallini, Giovanni ORCID: 0000-0003-0113-6682, Tischler, Verena, Vander Borght, Sara, Weynand, Birgit, Xu, Tom and Troncone, Giancarlo . TargetPlex FFPE-Direct DNA Library Preparation Kit for SiRe NGS panel: an international performance evaluation study. J. Clin. Pathol.. LONDON: BMJ PUBLISHING GROUP. ISSN 1472-4146

Pauly, Nina ORCID: 0000-0003-1726-8997, Baert, Thais, Schmutzler, Rita, du Bois, Andreas, Schneider, Stephanie, Rhiem, Kerstin, Schoemig-Markiefka, Birgid, Siemanowski, Janna, Heikaus, Sebastian, Traut, Alexander, Heitz, Florian, Prader, Sonia, Ehmann, Sarah, Harter, Philipp and Ataseven, Beyhan (2021). Modern day screening for Lynch syndrome in endometrial cancer: the KEM experience. Arch. Gynecol. Obstet., 304 (4). S. 975 - 985. HEIDELBERG: SPRINGER HEIDELBERG. ISSN 1432-0711

Quaas, Alexander, Biesma, Hedde D., Wagner, Anna D., Verheij, Marcel, Henegouwen, Mark I. van Berge, Schoemig-Markiefka, Birgid, Pamuk, Aylin, Zander, Thomas, Siemanowski, Janna, Sikorska, Karolina, Egthuijsen, Jacqueline M. P., Kranenbarg, Elma M. Meershoek-Klein, van de Velde, Cornelis J. H., Buettner, Reinhard, Alakus, Hakan, Cats, Annemieke, Ylstra, Bauke ORCID: 0000-0001-9479-3010, van Laarhoven, Hanneke W. M. and van Grieken, Nicole C. T. (2022). Microsatellite instability and sex differences in resectable gastric cancer - A pooled analysis of three European cohorts. Eur. J. Cancer, 173. S. 95 - 105. OXFORD: ELSEVIER SCI LTD. ISSN 1879-0852

Quaas, Alexander, Rehkaemper, Jan, Rueschoff, Josef, Pamuk, Aylin, Zander, Thomas, Hillmer, Axel, Siemanowski, Janna, Wittig, Jana, Buettner, Reinhard, Plum, Patrick, Popp, Felix, Gebauer, Florian, Bruns, Christiane Josephine, Loeser, Heike, Alakus, Hakan and Schoemig-Markiefka, Birgid (2021). Occurrence of High Microsatellite-Instability/Mismatch Repair Deficiency in Nearly 2,000 Human Adenocarcinomas of the Gastrointestinal Tract, Pancreas, and Bile Ducts: A Study From a Large German Comprehensive Cancer Center. Front. Oncol., 11. LAUSANNE: FRONTIERS MEDIA SA. ISSN 2234-943X

Riedel, Richard, Michels, Sebastian, Heydt, Carina, Siemanowski, Janna, Kobe, Carsten, Bunck, Anne, Schaefer, Stephan, Fischer, Rieke N., Scheffler, Matthias, Abdulla, Diana S. Y., Nogova, Lucia, Koleczko, Sophia, Merkelbach-Bruse, Sabine, Buettner, Reinhard and Wolf, Juergen (2019). Acquired KRAS mutation and loss of low-level MET amplification after durable response to crizotinib in a patient with lung adenocarcinoma. Lung Cancer, 133. S. 20 - 23. CLARE: ELSEVIER IRELAND LTD. ISSN 1872-8332

Scheffler, Matthias, Ihle, Michaela A., Hein, Rebecca, Merkelbach-Bruse, Sabine, Scheel, Andreas H., Siemanowski, Janna, Braegelmann, Johannes, Kron, Anna, Abedpour, Nima, Ueckeroth, Frank, Schueller, Merle, Koleczko, Sophia, Michels, Sebastian, Fassunke, Jana, Pasternack, Helen, Heydt, Carina, Serke, Monika, Fischer, Rieke, Schulte, Wolfgang, Gerigk, Ulrich, Nogova, Lucia, Ko, Yon-Dschun, Abdulla, Diana S. Y., Riedel, Richard, Kambartel, Karl-Otto, Lorenz, Joachim, Sauerland, Imke, Randerath, Winfried, Kaminsky, Britta, Hagmeyer, Lars, Grohe, Christian, Eisert, Anna, Frank, Rieke, Gogl, Leonie, Schaepers, Carsten, Holzem, Alessandra, Hellmich, Martin, Thomas, Roman K., Peifer, Martin, Sos, Martin L., Buettner, Reinhard and Wolf, Juergen (2019). K-ras Mutation Subtypes in NSCLC and Associated Co-occuring Mutations in Other Oncogenic Pathways. J. Thorac. Oncol., 14 (4). S. 606 - 617. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1556-1380

Schmitt-Engel, Christian, Schultheis, Dorothea, Schwirz, Jonas, Ströhlein, Nadi, Troelenberg, Nicole, Majumdar, Upalparna, Dao, Van Anh, Grossmann, Daniela, Richter, Tobias, Tech, Maike, Dönitz, Jürgen, Gerischer, Lizzy, Theis, Mirko, Schild, Inga, Trauner, Jochen, Koniszewski, Nikolaus D. B., Küster, Elke, Kittelmann, Sebastian, Hu, Yonggang, Lehmann, Sabrina, Siemanowski, Janna, Ulrich, Julia, Panfilio, Kristen A., Schröder, Reinhard, Morgenstern, Burkhard, Stanke, Mario, Buchhholz, Frank, Frasch, Manfred ORCID: 0000-0003-1373-9798, Roth, Siegfried ORCID: 0000-0001-5772-3558, Wimmer, Ernst A., Schoppmeier, Michael, Klingler, Martin and Bucher, Gregor ORCID: 0000-0002-4615-6401 (2015). The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology. Nature Communications, 6 (1). London: Nature Publishing Group UK. ISSN 2041-1723

Siemanowski, Janna, Heydt, Carina and Merkelbach-Bruse, Sabine (2020). Predictive molecular pathology of lung cancer in Germany with focus on gene fusion testing: Methods and quality assurance. Cancer Cytopathol., 128 (9). S. 611 - 622. HOBOKEN: WILEY. ISSN 1934-6638

Siemanowski, Janna, Richter, Tobias and Bucher, Gregor (2015). Notch signaling induces cell proliferation in the labrum in a regulatory network different from the thoracic legs. Dev. Biol., 408 (1). S. 164 - 178. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1095-564X

Siemanowski, Janna, Schoemig-Markiefka, Birgid, Buhl, Theresa, Haak, Anja, Siebolts, Udo ORCID: 0000-0002-7463-9195, Dietmaier, Wolfgang, Arens, Norbert, Pauly, Nina, Ataseven, Beyhan ORCID: 0000-0002-2823-7590, Buettner, Reinhard and Merkelbach-Bruse, Sabine (2021). Managing Difficulties of Microsatellite Instability Testing in Endometrial Cancer-Limitations and Advantages of Four Different PCR-Based Approaches. Cancers, 13 (6). BASEL: MDPI. ISSN 2072-6694

Wagener-Ryczek, Svenja, Merkelbach-Bruse, Sabine and Siemanowski, Janna (2021). Biomarkers for Homologous Recombination Deficiency in Cancer. J. Pers. Med., 11 (7). BASEL: MDPI. ISSN 2075-4426