Universität zu Köln

Journal Article

Chavarro-Carrero, Edgar A., Vermeulen, Jasper P., E. Torres, David, Usami, Toshiyuki, Schouten, Henk J., Bai, Yuling, Seidl, Michael F. and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 . Comparative genomics reveals the in planta-secreted Verticillium dahliae Av2 effector protein recognized in tomato plants that carry the V2 resistance locus. Environ. Microbiol.. HOBOKEN: WILEY. ISSN 1462-2920

Cook, David E., Valle-Inclan, Jose Espejo, Pajoro, Alice, Rovenich, Hanna, Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 and Faino, Luigi ORCID: 0000-0002-6807-4191 (2019). Long-Read Annotation: Automated Eukaryotic Genome Annotation Based on Long-Read cDNA Sequencing. Plant Physiol., 179 (1). S. 38 - 55. ROCKVILLE: AMER SOC PLANT BIOLOGISTS. ISSN 1532-2548

Depotter, Jasper R. L., van Beveren, Fabian ORCID: 0000-0003-2883-3090, Rodriguez-Moreno, Luis, Kramer, H. Martin, Carrero, Edgar A. Chavarro, Fiorin, Gabriel L., van den Berg, Grardy C. M., Wood, Thomas A., Thomma, Bart P. H. J. and Seidl, Michael F. (2021). The Interspecific Fungal Hybrid Verticillium longisporum Displays Subgenome-Specific Gene Expression. mBio, 12 (4). WASHINGTON: AMER SOC MICROBIOLOGY. ISSN 2150-7511

Ebert, Malaika K., Rangel, Lorena I., Spanner, Rebecca E., Taliadoros, Demetris, Wang, Xiaoyun, Friesen, Timothy L., de Jonge, Ronnie, Neubauer, Jonathan D., Secor, Gary A., Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181, Stukenbrock, Eva H. and Bolton, Melvin D. . Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1. Mol. Plant Pathol.. HOBOKEN: WILEY. ISSN 1364-3703

Kramer, H. Martin, Cook, David E., van den Berg, Grardy C. M., Seidl, Michael F. and Thomma, Bart P. H. J. (2021). Three putative DNA methyltransferases of Verticillium dahliae differentially contribute to DNA methylation that is dispensable for growth, development and virulence. Epigenetics Chromatin, 14 (1). LONDON: BMC. ISSN 1756-8935

Pruitt, Rory N., Locci, Federica, Wanke, Friederike ORCID: 0000-0001-6080-8800, Zhang, Lisha ORCID: 0000-0002-8203-2369, Saile, Svenja C., Joe, Anna, Karelina, Darya, Hua, Chenlei, Froehlich, Katja, Wan, Wei-Lin, Hu, Meijuan, Rao, Shaofei, Stolze, Sara C., Harzen, Anne ORCID: 0000-0001-7370-4939, Gust, Andrea A., Harter, Klaus, Joosten, Matthieu H. A. J., Thomma, Bart P. H. J., Zhou, Jian-Min, Dangl, Jeffery L., Weigel, Detlef ORCID: 0000-0002-2114-7963, Nakagami, Hirofumi ORCID: 0000-0003-2569-7062, Oecking, Claudia, El Kasmi, Farid ORCID: 0000-0002-4634-7689, Parker, Jane E. and Nuernberger, Thorsten (2021). The EDS1-PAD4-ADR1 node mediates Arabidopsis pattern-triggered immunity. Nature, 598 (7881). S. 495 - 518. BERLIN: NATURE PORTFOLIO. ISSN 1476-4687

Rovenich, Hanna, Zuccaro, Alga ORCID: 0000-0002-8026-0114 and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 (2016). Convergent evolution of filamentous microbes towards evasion of glycan-triggered immunity. New Phytol., 212 (4). S. 896 - 902. HOBOKEN: WILEY. ISSN 1469-8137

Sanchez-Vallet, Andrea, Tian, Hui, Rodriguez-Moreno, Luis ORCID: 0000-0003-2385-8782, Valkenburg, Dirk-Jan, Saleem-Batcha, Raspudin, Wawra, Stephan, Kombrink, Anja, Verhage, Leonie, de Jonge, Ronnie ORCID: 0000-0001-5065-8538, van Esse, H. Peter, Zuccaro, Alga ORCID: 0000-0002-8026-0114, Croll, Daniel ORCID: 0000-0002-2072-380X, Mesters, Jeroen R. and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 (2020). A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization. PLoS Pathog., 16 (6). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7374

Seidl, Michael F., Kramer, H. Martin, Cook, David E., Fiorin, Gabriel L., van den Berg, Grardy C. M., Faino, Luigi and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 (2020). Repetitive Elements Contribute to the Diversity and Evolution of Centromeres in the Fungal Genus Verticillium. mBio, 11 (5). WASHINGTON: AMER SOC MICROBIOLOGY. ISSN 2150-7511

Shi-Kunne, Xiaoqian, Jove, Roger de Pedro, Depotter, Jasper R. L., Ebert, Malaika K., Seidl, Michael F. and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 (2019). In silico prediction and characterisation of secondary metabolite clusters in the plant pathogenic fungus Verticillium dahliae. FEMS Microbiol. Lett., 366 (7). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6968

Shi-Kunne, Xiaoqian, van Kooten, Mathijs, Depotter, Jasper R. L., Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 and Seidl, Michael F. (2019). The Genome of the Fungal Pathogen Verticillium dahliae Reveals Extensive Bacterial to Fungal Gene Transfer. Genome Biol. Evol., 11 (3). S. 855 - 869. OXFORD: OXFORD UNIV PRESS. ISSN 1759-6653

Snelders, Nick C., Rovenich, Hanna, Petti, Gabriella C., Rocafort, Mercedes ORCID: 0000-0001-7192-695X, van den Berg, Grardy C. M., Vorholt, Julia A. ORCID: 0000-0002-6011-4910, Mesters, Jeroen R., Seidl, Michael F., Nijland, Reindert ORCID: 0000-0003-0049-3768 and Thomma, Bart P. H. J. ORCID: 0000-0003-4125-4181 (2020). Microbiome manipulation by a soil-borne fungal plant pathogen using effector proteins. Nat. Plants, 6 (11). S. 1365 - 1387. BERLIN: NATURE RESEARCH. ISSN 2055-0278

Snelders, Nick C., Rovenich, Hanna and Thomma, Bart P. H. J. (2022). Microbiota manipulation through the secretion of effector proteins is fundamental to the wealth of lifestyles in the fungal kingdom. Fems Microbiol. Rev., 46 (5). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6976

Snelders, Nick C. C., Boshoven, Jordi C. C., Song, Yin, Schmitz, Natalie, Fiorin, Gabriel L. L., Rovenich, Hanna ORCID: 0000-0001-6138-4480, van den Berg, Grardy C. M., Torres, David E. E., Petti, Gabriella C. C., Prockl, Zoe ORCID: 0000-0001-6802-5800, Faino, Luigi, Seidl, Michael F. F. and Thomma, Bart P. H. J. (2023). A highly polymorphic effector protein promotes fungal virulence through suppression of plant-associated Actinobacteria. New Phytol., 237 (3). S. 944 - 959. HOBOKEN: WILEY. ISSN 1469-8137

Tian, Hui, Fiorin, Gabriel L., Kombrink, Anja, Mesters, Jeroen R. and Thomma, Bart P. H. J. (2022). Fungal dual-domain LysM effectors undergo chitin-induced intermolecular, and not intramolecular, dimerization. Plant Physiol., 190 (3). S. 2033 - 2045. CARY: OXFORD UNIV PRESS INC. ISSN 1532-2548

Tian, Hui, MacKenzie, Craig I., Rodriguez-Moreno, Luis, van den Berg, Grardy C. M., Chen, Hongxin, Rudd, Jason J., Mesters, Jeroen R. and Thomma, Bart P. H. J. (2021). Three LysM effectors of Zymoseptoria tritici collectively disarm chitin-triggered plant immunity. Mol. Plant Pathol., 22 (6). S. 683 - 694. HOBOKEN: WILEY. ISSN 1364-3703

Torres, David E., Thomma, Bart P. H. J. and Seidl, Michael F. (2021). Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae. Genome Biol. Evol., 13 (7). OXFORD: OXFORD UNIV PRESS. ISSN 1759-6653

Vermeulen, Jasper P., Hanika, Katharina ORCID: 0000-0003-0336-3985, Thomma, Bart P. H. J., Bai, Yuling and Schouten, Henk J. (2022). Scarcity of major resistance genes against Verticillium wilt caused by Verticillium dahliae. Plant Breed., 141 (5). S. 681 - 695. HOBOKEN: WILEY. ISSN 1439-0523