Universität zu Köln

Journal Article

Disanto, Filippo, Schlizio, Anna and Wiehe, Thomas (2013). Yule-generated trees constrained by node imbalance. Math. Biosci., 246 (1). S. 139 - 148. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1879-3134

Disanto, Filippo and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2020). Measuring the external branches of a Kingman tree: A discrete approach. Theor. Popul. Biol., 134. S. 92 - 106. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1096-0325

Disanto, Filippo and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2014). On the sub-permutations of pattern avoiding permutations. Discret. Math., 337. S. 127 - 142. AMSTERDAM: ELSEVIER. ISSN 1872-681X

Ferretti, Luca ORCID: 0000-0001-7578-7301, Klassmann, Alexander ORCID: 0000-0002-0175-1397, Raineri, Emanuele, Ramos-Onsins, Sebastian E., Wiehe, Thomas ORCID: 0000-0002-8932-2772 and Achaz, Guillaume (2018). The neutral frequency spectrum of linked sites. Theor. Popul. Biol., 123. S. 70 - 80. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1096-0325

Ferretti, Luca ORCID: 0000-0001-7578-7301, Ledda, Alice, Wiehe, Thomas ORCID: 0000-0002-8932-2772, Achaz, Guillaume and Ramos-Onsins, Sebastian E. (2017). Decomposing the Site Frequency Spectrum: The Impact of Tree Topology on Neutrality Tests. Genetics, 207 (1). S. 229 - 241. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Heger, Peter ORCID: 0000-0003-2583-2981, George, Rebecca and Wiehe, Thomas (2013). SUCCESSIVE GAIN OF INSULATOR PROTEINS IN ARTHROPOD EVOLUTION. Evolution, 67 (10). S. 2945 - 2957. HOBOKEN: WILEY. ISSN 1558-5646

Heger, Peter ORCID: 0000-0003-2583-2981, Marin, Birger, Bartkuhn, Marek ORCID: 0000-0001-6872-9082, Schierenberg, Einhard and Wiehe, Thomas (2012). The chromatin insulator CTCF and the emergence of metazoan diversity. Proc. Natl. Acad. Sci. U. S. A., 109 (43). S. 17507 - 17513. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Heger, Peter ORCID: 0000-0003-2583-2981 and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2014). New tools in the box: An evolutionary synopsis chromatin insulators. Trends Genet., 30 (5). S. 161 - 172. LONDON: ELSEVIER SCIENCE LONDON. ISSN 1362-4555

Heger, Peter ORCID: 0000-0003-2583-2981, Zheng, Wen, Rottmann, Anna, Panfilio, Kristen A. and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2020). The genetic factors of bilaterian evolution. eLife, 9. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD. ISSN 2050-084X

Howe, Kerstin ORCID: 0000-0003-2237-513X, Schiffer, Philipp H., Zielinski, Julia, Wiehe, Thomas ORCID: 0000-0002-8932-2772, Laird, Gavin K., Marioni, John C., Soylemez, Onuralp, Kondrashov, Fyodor and Leptin, Maria ORCID: 0000-0001-7097-348X (2016). Structure and evolutionary history of a large family of NLR proteins in the zebrafish. Open Biol, 6 (4). LONDON: ROYAL SOC. ISSN 2046-2441

Jabbari, Kamel, Chakraborty, Maharshi and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2019). DNA sequence-dependent chromatin architecture and nuclear hubs formation. Sci Rep, 9. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Jabbari, Kamel, Heger, Peter ORCID: 0000-0003-2583-2981, Sharma, Ranu and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2018). The Diverging Routes of BORIS and CTCF: An Interactomic and Phylogenomic Analysis. Life-Basel, 8 (1). BASEL: MDPI. ISSN 2075-1729

Jabbari, Kamel, Wirtz, Johannes, Rauscher, Martina and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2019). A common genomic code for chromatin architecture and recombination landscape. PLoS One, 14 (3). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1932-6203

Otto, Moritz ORCID: 0000-0001-5407-373X, Zheng, Yichen and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2022). Recombination, selection, and the evolution of tandem gene arrays. Genetics, 221 (3). BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Pauli, Thomas, Vedder, Lucia ORCID: 0000-0002-8924-9800, Dowling, Daniel, Petersen, Malte ORCID: 0000-0001-7601-9873, Meusemann, Karen, Donath, Alexander ORCID: 0000-0001-5618-0547, Peters, Ralph S., Podsiadlowski, Lars ORCID: 0000-0001-7786-8930, Mayer, Christoph ORCID: 0000-0001-5104-6621, Liu, Shanlin, Zhou, Xin, Heger, Peter ORCID: 0000-0003-2583-2981, Wiehe, Thomas ORCID: 0000-0002-8932-2772, Hering, Lars ORCID: 0000-0003-4469-991X, Mayer, Georg ORCID: 0000-0003-0737-2440, Misof, Bernhard and Niehuis, Oliver (2016). Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects. BMC Genomics, 17. LONDON: BMC. ISSN 1471-2164

Schiffer, Philipp H., Danchin, Etienne G. J., Burnell, Ann M., Creevey, Christopher J., Wong, Simon, Dix, Ilona, O'Mahony, Georgina, Culleton, Bridget A., Rancurel, Corinne ORCID: 0000-0001-9355-5491, Stier, Gary, Martinez-Salazar, Elizabeth A., Marconi, Aleksandra, Trivedi, Urmi, Kroiher, Michael, Thorne, Michael A. S., Schierenberg, Einhard, Wiehe, Thomas ORCID: 0000-0002-8932-2772 and Blaxter, Mark (2019). Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes. iScience, 21. S. 587 - 640. CAMBRIDGE: CELL PRESS. ISSN 2589-0042

Suurvaeli, Jaanus, Whiteley, Andrew R., Zheng, Yichen, Gharbi, Karim ORCID: 0000-0003-1092-4488, Leptin, Maria ORCID: 0000-0001-7097-348X and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2020). The Laboratory Domestication of Zebrafish: From Diverse Populations to Inbred Substrains. Mol. Biol. Evol., 37 (4). S. 1056 - 1070. OXFORD: OXFORD UNIV PRESS. ISSN 1537-1719

Wirtz, Johannes, Rauscher, Martina and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2018). Topological linkage disequilibrium calculated from coalescent genealogies. Theor. Popul. Biol., 124. S. 41 - 51. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1096-0325

Wirtz, Johannes and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2019). The Evolving Moran Genealogy. Theor. Popul. Biol., 130. S. 94 - 106. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1096-0325

Yang, Zongfeng, Li, Junrui, Wiehe, Thomas ORCID: 0000-0002-8932-2772 and Li, Haipeng (2018). Detecting Recent Positive Selection with a Single Locus Test Bipartitioning the Coalescent Tree. Genetics, 208 (2). S. 791 - 806. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Zheng, Yichen and Wiehe, Thomas ORCID: 0000-0002-8932-2772 (2019). Adaptation in structured populations and fuzzy boundaries between hard and soft sweeps. PLoS Comput. Biol., 15 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7358

Preprints, Working Papers or Reports

Wiehe, Thomas (2020). Counting, grafting and evolving binary trees. Technical Report.