Universität zu Köln

Journal Article

Rindt, Oscar ORCID: 0000-0001-9870-4580, Rosinger, Christoph ORCID: 0000-0002-4973-3921, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Rixen, Christian ORCID: 0000-0002-2486-9988, Brueggemann, Nicolas, Urich, Tim ORCID: 0000-0002-5718-1354 and Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907 (2023). Biogeochemical dynamics during snowmelt and in summer in the Alps. Biogeochemistry, 162 (2). S. 257 - 267. DORDRECHT: SPRINGER. ISSN 1573-515X

Starke, Robert, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, White, Richard Allen, Fernandes, Maysa Lima Parente, Martinovic, Tijana ORCID: 0000-0001-6940-0473, Bastida, Felipe, Delgado-Baquerizo, Manuel and Jehmlich, Nico (2022). Biomarker metaproteomics for relative taxa abundances across soil organisms. Soil Biol. Biochem., 175. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 1879-3428

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Human, Zander R., Stursova, Martina, Mundra, Sunil, Morgado, Luis, Kauserud, Havard, Baldrian, Petr ORCID: 0000-0002-8983-2721 and Bonkowski, Michael (2022). Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition. Soil Biol. Biochem., 168. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 1879-3428

Walden, Susanne, Jauss, Robin-Tobias, Feng, Kai ORCID: 0000-0002-9954-570X, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Schaffer, Stefan, Wolf, Ronny, Schlegel, Martin and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2021). On the phenology of protists: recurrent patterns reveal seasonal variation of protistan (Rhizaria: Cercozoa and Endomyxa) communities in tree canopies. FEMS Microbiol. Ecol., 97 (7). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Felipe-Lucia, Maria R., Soliveres, Santiago, Penone, Caterina ORCID: 0000-0002-8170-6659, Fischer, Markus, Ammer, Christian, Boch, Steffen ORCID: 0000-0003-2814-5343, Boeddinghaus, Runa S., Bonkowski, Michael, Buscot, Francois, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Franki, Kevin, Goldmann, Kezia, Gossner, Martin M., Hoelzel, Norbert, Jochum, Malte, Kandeler, Ellen, Klaus, Valentin H. ORCID: 0000-0002-7469-6800, Kleinebecker, Till, Leimer, Sophia ORCID: 0000-0001-6272-204X, Manning, Peter, Oelmann, Yvonne, Saiz, Hugo, Schall, Peter, Schloter, Michael, Schoening, Ingo, Schrumpf, Marion, Solly, Emily F., Stempfhuber, Barbara, Weisser, Wolfgang W., Wilcke, Wolfgang, Wubet, Tesfaye and Allan, Eric (2020). Land-use intensity alters networks between biodiversity, ecosystem functions, and services. Proc. Natl. Acad. Sci. U. S. A., 117 (45). S. 28140 - 28150. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Bass, David and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2020). Making sense of environmental sequencing data: Ecologically important functional traits of the protistan groups Cercozoa and Endomyxa (Rhizaria). Mol. Ecol. Resour., 20 (2). S. 398 - 404. HOBOKEN: WILEY. ISSN 1755-0998

Rossmann, Maike, Perez-Jaramillo, Juan E., Kavamura, Vanessa N., Chiaramonte, Josiane B., Dumack, Kenneth, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Mendes, Lucas W., Ferreira, Marcia M. C., Bonkowski, Michael, Raaijmakers, Jos M., Mauchline, Tim H. and Mendes, Rodrigo (2020). Multitrophic interactions in the rhizosphere microbiome of wheat: from bacteria and fungi to protists. FEMS Microbiol. Ecol., 96 (4). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Strelow, Daniel ORCID: 0000-0003-1530-2717, De Haan, Myriam, Bonkowski, Michael and Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907 (2020). New insights into the phylogeny of the dark-spored Myxomycetes (Amoebozoa: Conosa: Myxogastria: Fuscisporidia) and polyphyly of the genus Stemonitis. Syst. Biodivers., 18 (3). S. 228 - 237. ABINGDON: TAYLOR & FRANCIS LTD. ISSN 1478-0933

Cainelli, Renato, de Haan, Myriam, Meyer, Marianne, Bonkowski, Michael and Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907 (2020). Phylogeny of Physarida (Amoebozoa, Myxogastria) Based on the Small-Subunit Ribosomal RNA Gene, Redefinition of Physarum pusillum s. str. and Reinstatement of P. gravidum Morgan. J. Eukaryot. Microbiol., 67 (3). S. 327 - 337. HOBOKEN: WILEY. ISSN 1550-7408

Degrune, Florine, Dumack, Kenneth, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Bonkowski, Michael, Sosa-Hernandez, Moises A., Schloter, Michael, Kautz, Timo, Fischer, Doreen and Rillig, Matthias C. ORCID: 0000-0003-3541-7853 (2019). Distinct communities of Cercozoa at different soil depths in a temperate agricultural field. FEMS Microbiol. Ecol., 95 (4). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Richter-Heitmann, Tim ORCID: 0000-0002-2791-7252, Degrune, Florine, Dumack, Kenneth, Regan, Kathleen M., Marhan, Sven, Boeddinghaus, Runa S., Rillig, Matthias C. ORCID: 0000-0003-3541-7853, Friedrich, Michael W. ORCID: 0000-0002-8055-3232, Kandeler, Ellen ORCID: 0000-0002-2854-0012 and Bonkowski, Michael (2019). Functional Traits and Spatio-Temporal Structure of a Major Group of Soil Protists (Rhizaria: Cercozoa) in a Temperate Grassland. Front. Microbiol., 10. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

Voss, Christian, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Guerreiro, Marco Alexandre, Persoh, Derek and Bonkowski, Michael (2019). Metatranscriptomics reveals unsuspected protistan diversity in leaf litter across temperate beech forests, with Amoebozoa the dominating lineage. FEMS Microbiol. Ecol., 95 (10). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Tice, Alexander K. and Brown, Matthew W. (2019). A Non-Flagellated Member of the Myxogastria and Expansion of the Echinosteliida. J. Eukaryot. Microbiol., 66 (4). S. 538 - 545. HOBOKEN: WILEY. ISSN 1550-7408

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Rixen, Christian, Rippin, Martin, Glaser, Karin, Samolov, Elena, Karsten, Ulf, Becker, Burkhard ORCID: 0000-0002-7965-1396 and Bonkowski, Michael (2018). New barcoded primers for efficient retrieval of cercozoan sequences in high-throughput environmental diversity surveys, with emphasis on worldwide biological soil crusts. Mol. Ecol. Resour., 18 (2). S. 229 - 240. HOBOKEN: WILEY. ISSN 1755-0998

Geisen, Stefan ORCID: 0000-0003-0734-727X, Mitchell, Edward A. D., Wilkinson, David M., Adl, Sina ORCID: 0000-0001-6324-6065, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Brown, Matthew W., Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Heger, Thierry J., Jassey, Vincent E. J., Krashevska, Valentyna ORCID: 0000-0002-9765-5833, Lahr, Daniel J. G., Marcisz, Katarzyna ORCID: 0000-0003-2655-9729, Mulot, Matthieu, Payne, Richard, Singer, David ORCID: 0000-0002-4116-033X, Anderson, O. Roger, Charman, Dan J., Ekelund, Flemming, Griffiths, Bryan S., Ronn, Regin ORCID: 0000-0002-7486-1191, Smirnov, Alexey ORCID: 0000-0001-5361-8232, Bass, David, Belbahri, Lassaad ORCID: 0000-0001-7040-4500, Berney, Cedric ORCID: 0000-0001-8689-9907, Blandenier, Quentin ORCID: 0000-0002-4297-0262, Chatzinotas, Antonis ORCID: 0000-0002-0387-9802, Clarholm, Marianne, Dunthorn, Micah, Feest, Alan, Fernandez, Leonardo D., Foissner, Wilhelm, Fournier, Bertrand ORCID: 0000-0002-7106-6109, Gentekaki, Eleni, Hajek, Michal ORCID: 0000-0002-5201-2682, Helder, Johannes, Jousset, Alexandre, Koller, Robert ORCID: 0000-0001-7251-7242, Kumar, Santosh, La Terza, Antonietta ORCID: 0000-0002-1244-1503, Lamentowicz, Mariusz ORCID: 0000-0003-0429-1530, Mazei, Yuri ORCID: 0000-0002-5443-8919, Santos, Susana S., Seppey, Christophe V. W., Spiegel, Frederick W., Walochnik, Julia ORCID: 0000-0003-0356-2853, Winding, Anne and Lara, Enrique ORCID: 0000-0001-8500-522X (2017). Soil protistology rebooted: 30 fundamental questions to start with. Soil Biol. Biochem., 111. S. 94 - 104. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 0038-0717

Tice, Alexander K., Shadwick, Lora L., Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Geisen, Stefan ORCID: 0000-0003-0734-727X, Kang, Seungho, Schuler, Gabriel A., Spiegel, Frederick W., Wilkinson, Katherine A., Bonkowski, Michael ORCID: 0000-0003-2656-1183, Dumack, Kenneth, Lahr, Daniel J. G., Voelcker, Eckhard, Clauss, Steffen, Zhang, Junling and Brown, Matthew W. (2016). Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group. Biol. Direct, 11. LONDON: BMC. ISSN 1745-6150

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Weinert, Jan, Wubet, Tesfaye ORCID: 0000-0001-8572-4486 and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2016). Metacommunity analysis of amoeboid protists in grassland soils. Sci Rep, 6. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Kretzschmar, Martin, Kuhnt, Andreas, Bonkowski, Michael and Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907 (2016). Phylogeny of the Highly Divergent Echinosteliales (Amoebozoa). J. Eukaryot. Microbiol., 63 (4). S. 453 - 460. HOBOKEN: WILEY. ISSN 1550-7408

Clissmann, Fionn, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Hoppe, Bjoern, Krueger, Dirk, Kahl, Tiemo, Unterseher, Martin and Schnittler, Martin (2015). First insight into dead wood protistan diversity: a molecular sampling of bright-spored Myxomycetes (Amoebozoa, slime-moulds) in decaying beech logs. FEMS Microbiol. Ecol., 91 (6). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Geisen, Stefan ORCID: 0000-0003-0734-727X, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Walochnik, Julia ORCID: 0000-0003-0356-2853 and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2014). Acanthamoeba everywhere: high diversity of Acanthamoeba in soils. Parasitol. Res., 113 (9). S. 3151 - 3159. NEW YORK: SPRINGER. ISSN 1432-1955

Pawlowski, Jan ORCID: 0000-0003-2421-388X, Audic, Stephane ORCID: 0000-0001-6193-4374, Adl, Sina ORCID: 0000-0001-6324-6065, Bass, David, Belbahri, Lassaad ORCID: 0000-0001-7040-4500, Berney, Cedric ORCID: 0000-0001-8689-9907, Bowser, Samuel S., Cepicka, Ivan ORCID: 0000-0002-4322-0754, Decelle, Johan ORCID: 0000-0002-4343-8358, Dunthorn, Micah, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Gile, Gillian H., Holzmann, Maria, Jahn, Regine, Jirku, Miloslav, Keeling, Patrick J., Kostka, Martin, Kudryavtsev, Alexander ORCID: 0000-0002-3818-3610, Lara, Enrique ORCID: 0000-0001-8500-522X, Lukes, Julius ORCID: 0000-0002-0578-6618, Mann, David G., Mitchell, Edward A. D., Nitsche, Frank ORCID: 0000-0003-3950-8285, Romeralo, Maria, Saunders, Gary W., Simpson, Alastair G. B., Smirnov, Alexey V. ORCID: 0000-0002-9844-5344, Spouge, John L., Stern, Rowena F., Stoeck, Thorsten, Zimmermann, Jonas, Schindel, David and de Vargas, Colomban (2012). CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms. PLoS. Biol., 10 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1545-7885

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907 and Bonkowski, Michael . Different community compositions between obligate and facultative oomycete plant parasites in a landscape-scale metabarcoding survey. Biol. Fertil. Soils. NEW YORK: SPRINGER. ISSN 1432-0789