Universität zu Köln

Journal Article

Hameed, Shahul Dharjath, van Tilburg, Gabrielle B. A., Merkx, Remco, Flierman, Dennis, Wienk, Hans ORCID: 0000-0001-9577-0064, El Oualid, Farid, Hofmann, Kay ORCID: 0000-0002-2289-9083, Boelens, Rolf ORCID: 0000-0002-6939-8913 and Ovaa, Huib (2020). Diubiquitin-Based NMR Analysis: Interactions Between Lys6-Linked diUb and UBA Domain of UBXN1. Front. Chem., 7. LAUSANNE: FRONTIERS MEDIA SA. ISSN 2296-2646

Hofmann, Kay ORCID: 0000-0002-2289-9083 (2020). The Evolutionary Origins of Programmed Cell Death Signaling. Cold Spring Harb. Perspect. Med., 10 (10). COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 2157-1422

Hofmann, Kay ORCID: 0000-0002-2289-9083 (2020). The Evolutionary Origins of Programmed Cell Death Signaling. Cold Spring Harbor Perspect. Biol., 12 (9). COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 1943-0264

Reinking, Hannah K., Hofmann, Kay ORCID: 0000-0002-2289-9083 and Stingele, Julian ORCID: 0000-0001-6020-2075 (2020). Function and evolution of the DNA-protein crosslink proteases Wss1 and SPRTN. DNA Repair, 88. AMSTERDAM: ELSEVIER. ISSN 1568-7856

Schubert, Alexander F., Nguyen, Justine, V, Franklin, Tyler G., Geurink, Paul P., Roberts, Cameron G., Sanderson, Daniel J., Miller, Lauren N., Ovaa, Huib, Hofmann, Kay ORCID: 0000-0002-2289-9083, Pruneda, Jonathan N. and Komander, David (2020). Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39 (15). HOBOKEN: WILEY. ISSN 1460-2075

Schubert, Alexander F., Nguyen, Justine, V, Franklin, Tyler G., Geurink, Paul P., Roberts, Cameron G., Sanderson, Daniel J., Miller, Lauren N., Ovaa, Huib, Hofmann, Kay ORCID: 0000-0002-2289-9083, Pruneda, Jonathan N. and Komander, David (2020). Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39 (15). HOBOKEN: WILEY. ISSN 1460-2075

Finger, Yannik, Habich, Markus, Gerlich, Sarah, Urbanczyk, Sophia, van de Logt, Erik, Koch, Julian ORCID: 0000-0001-7829-3411, Schu, Laura, Lapacz, Kim Jasmin, Ali, Muna, Petrungaro, Carmelina, Salscheider, Silja Lucia, Pichlo, Christian, Baumann, Ulrich, Mielenz, Dirk, Dengjel, Joern, Brachvogel, Bent, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Riemer, Jan (2020). Proteasomal degradation induced by DPP9-mediated processing competes with mitochondrial protein import. Embo J., 39 (19). HOBOKEN: WILEY. ISSN 1460-2075

Marshall, Richard S., Gemperline, David C., McLoughlin, Fionn, Book, Adam J., Hofmann, Kay ORCID: 0000-0002-2289-9083 and Vierstra, Richard D. (2020). An evolutionarily distinct chaperone promotes 20S proteasome alpha-ring assembly in plants. J. Cell Sci., 133 (21). CAMBRIDGE: COMPANY BIOLOGISTS LTD. ISSN 1477-9137

Hermanns, Thomas, Woiwode, Ilka, Guerreiro, Ricardo F. M., Vogt, Robert, Lammers, Michael ORCID: 0000-0003-4168-4640 and Hofmann, Kay ORCID: 0000-0002-2289-9083 (2020). An evolutionary approach to systematic discovery of novel deubiquitinases, applied to Legionella. Life Sci. Alliance, 3 (9). COLD SPRING HARBOR: LIFE SCIENCE ALLIANCE LLC. ISSN 2575-1077

Pao, Kuan-Chuan, Wood, Nicola T., Knebel, Axel, Rafie, Karim, Stanley, Mathew, Mabbitt, Peter D., Sundaramoorthy, Ramasubramanian, Hofmann, Kay ORCID: 0000-0002-2289-9083, van Aalten, Daan M. F. and Virdee, Satpal ORCID: 0000-0002-7052-9802 (2018). Activity-based E3 ligase profiling uncovers an E3 ligase with esterification activity. Nature, 556 (7701). S. 381 - 406. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4687

Jin, Bo, Wang, Jiayue, Liu, Xiangnan, Fang, Shuai, Jiang, Bo, Hofmann, Kay ORCID: 0000-0002-2289-9083, Yin, Jun and Zhao, Bo (2018). Ubiquitin-Mimicking Peptides Transfer Differentiates by E1 and E2 Enzymes. Biomed Res. Int., 2018. LONDON: HINDAWI LTD. ISSN 2314-6141

Anding, Allyson L., Wang, Chunxin ORCID: 0000-0001-6015-6806, Chang, Tsun-Kai, Sliter, Danielle A., Powers, Christine M., Hofmann, Kay ORCID: 0000-0002-2289-9083, Youle, Richard J. and Baehrecke, Eric H. (2018). Vps13D Encodes a Ubiquitin-Binding Protein that Is Required for the Regulation of Mitochondrial Size and Clearance. Curr. Biol., 28 (2). S. 287 - 302. CAMBRIDGE: CELL PRESS. ISSN 1879-0445

Turakhiya, Ankit, Meyer, Susanne R., Marincola, Gabriella ORCID: 0000-0001-9227-6554, Boehm, Stefanie, Vanselow, Jens T., Schlosser, Andreas, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Buchberger, Alexander ORCID: 0000-0002-2836-0820 (2018). ZFAND1 Recruits p97 and the 26S Proteasome to Promote the Clearance of Arsenite-Induced Stress Granules. Mol. Cell, 70 (5). S. 906 - 927. CAMBRIDGE: CELL PRESS. ISSN 1097-4164

Marx, Benjamin, Miller-Lazic, Daliborka, Doorbar, John, Majewski, Slawomir, Hofmann, Kay ORCID: 0000-0002-2289-9083, Hufbauer, Martin and Akguel, Baki (2017). HPV8-E6 Interferes with Syntenin-2 Expression through Deregulation of Differentiation, Methylation and Phosphatidylinositide-Kinase Dependent Mechanisms. Front. Microbiol., 8. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

Poulsen, Esben G., Kampmeyer, Caroline, Kriegenburg, Franziska, Johansen, Jens V., Hofmann, Kay ORCID: 0000-0002-2289-9083, Holmberg, Christian ORCID: 0000-0001-9224-0543 and Hartmann-Petersen, Rasmus ORCID: 0000-0002-4155-7791 (2017). UBL/BAG-domain co-chaperones cause cellular stress upon overexpression through constitutive activation of Hsf1. Cell Stress Chaperones, 22 (1). S. 143 - 155. DORDRECHT: SPRINGER. ISSN 1466-1268

Daskalov, Asen, Habenstein, Birgit ORCID: 0000-0003-3723-9552, Sabate, Raimon, Berbon, Melanie, Martinez, Denis, Chaignepain, Stephane, Coulary-Salin, Benedicte, Hofmann, Kay ORCID: 0000-0002-2289-9083, Loquet, Antoine ORCID: 0000-0001-7176-7813 and Saupe, Sven J. (2016). Identification of a novel cell death-inducing domain reveals that fungal amyloid-controlled programmed cell death is related to necroptosis. Proc. Natl. Acad. Sci. U. S. A., 113 (10). S. 2720 - 2726. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Asaoka, Tomoko ORCID: 0000-0001-5141-2353, Almagro, Jorge, Ehrhardt, Christine, Tsai, Isabella, Schleiffer, Alexander ORCID: 0000-0001-6251-2747, Deszcz, Luiza, Junttila, Sini, Ringrose, Leonie, Mechtler, Karl ORCID: 0000-0002-3392-9946, Kavirayani, Anoop, Gyenesei, Attila, Hofmann, Kay ORCID: 0000-0002-2289-9083, Duchek, Peter, Rittinger, Katrin ORCID: 0000-0002-7698-4435 and Ikeda, Fumiyo ORCID: 0000-0003-0407-2768 (2016). Linear ubiquitination by LUBEL has a role in Drosophila heat stress response. EMBO Rep., 17 (11). S. 1624 - 1641. HOBOKEN: WILEY. ISSN 1469-3178

Rehman, Syed Arif Abdul, Kristariyanto, Yosua Adi, Choi, Soo-Youn, Nkosi, Pedro Junior, Weidlich, Simone, Labib, Karim, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Kulathu, Yogesh ORCID: 0000-0002-3274-1642 (2016). MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes. Mol. Cell, 63 (1). S. 146 - 156. CAMBRIDGE: CELL PRESS. ISSN 1097-4164

Roempler, Katharina, Mueller, Tobias, Juris, Lisa, Wissel, Mirjam, Vukotic, Milena, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Deckers, Markus (2016). Overlapping Role of Respiratory Supercomplex Factor Rcf2 and Its N-terminal Homolog Rcf3 in Saccharomyces cerevisiae. J. Biol. Chem., 291 (45). S. 23769 - 23779. BETHESDA: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X

Fumagalli, Fiorenza, Noack, Julia, Bergmann, Timothy J., Presmanes, Eduardo Cebollero, Pisoni, Giorgia Brambilla, Fasana, Elisa, Fregno, Ilaria ORCID: 0000-0003-0546-8764, Galli, Carmela, Loi, Marisa ORCID: 0000-0002-9186-8379, Solda, Tatiana, D'Antuono, Rocco ORCID: 0000-0003-0180-6500, Raimondi, Andrea ORCID: 0000-0002-4563-386X, Jung, Martin ORCID: 0000-0002-1482-7020, Melnyk, Armin, Schorr, Stefan, Schreiber, Anne ORCID: 0000-0001-6766-2808, Simonelli, Luca ORCID: 0000-0001-6331-7716, Varani, Luca, Wilson-Zbinden, Caroline, Zerbe, Oliver, Hofmann, Kay ORCID: 0000-0002-2289-9083, Peter, Matthias ORCID: 0000-0002-2160-6824, Quadroni, Manfredo ORCID: 0000-0002-2720-4084, Zimmermann, Richard and Molinari, Maurizio ORCID: 0000-0002-7636-5829 (2016). Translocon component Sec62 acts in endoplasmic reticulum turnover during stress recovery. Nat. Cell Biol., 18 (11). S. 1173 - 1199. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4679

Krupina, Ksenia, Kleiss, Charlotte, Metzger, Thibaud, Fournane, Sadek, Schmucker, Stephane, Hofmann, Kay ORCID: 0000-0002-2289-9083, Fischer, Benoit, Paul, Nicodeme, Porter, Iain Malcolm, Raffelsberger, Wolfgang, Poch, Olivier, Swedlow, Jason Reese, Brino, Laurent and Sumara, Izabela ORCID: 0000-0002-5968-3358 (2016). Ubiquitin Receptor Protein UBASH3B Drives Aurora B Recruitment to Mitotic Microtubules. Dev. Cell, 36 (1). S. 63 - 79. CAMBRIDGE: CELL PRESS. ISSN 1878-1551

Wilson-Zbinden, Caroline, dos Santos, Aline Xavier da Silveira, Stoffel-Studer, Ingrid, van der Vaart, Aniek, Hofmann, Kay ORCID: 0000-0002-2289-9083, Reggiori, Fulvio ORCID: 0000-0003-2652-2686, Riezman, Howard ORCID: 0000-0003-4680-9422, Kraft, Claudine and Peter, Matthias ORCID: 0000-0002-2160-6824 (2015). Autophagy Competes for a Common Phosphatidylethanolamine Pool with Major Cellular PE-Consuming Pathways in Saccharomyces cerevisiae. Genetics, 199 (2). S. 475 - 486. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Louis, Marcell, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Broemer, Meike (2015). Evolutionary Loss of Activity in De-Ubiquitylating Enzymes of the OTU Family. PLoS One, 10 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1932-6203

Eisenhardt, Nathalie, Chaugule, Viduth K. ORCID: 0000-0001-7814-5865, Koidl, Stefanie, Droescher, Mathias, Dogan, Esen, Rettich, Jan, Sutinen, Paeivi, Imanishi, Susumu Y., Hofmann, Kay ORCID: 0000-0002-2289-9083, Palvimo, Jorma J. and Pichler, Andrea (2015). A new vertebrate SUMO enzyme family reveals insights into SUMO-chain assembly. Nat. Struct. Mol. Biol., 22 (12). S. 959 - 968. NEW YORK: NATURE PUBLISHING GROUP. ISSN 1545-9985

Tomanov, Konstantin, Zeschmann, Anja, Hermkes, Rebecca, Eifler, Karolin, Ziba, Ionida, Grieco, Michele ORCID: 0000-0002-2418-5738, Novatchkova, Maria, Hofmann, Kay ORCID: 0000-0002-2289-9083, Hesse, Holger and Bachmair, Andreas ORCID: 0000-0001-7731-1841 (2014). Arabidopsis PIAL1 and 2 Promote SUMO Chain Formation as E4-Type SUMO Ligases and Are Involved in Stress Responses and Sulfur Metabolism. Plant Cell, 26 (11). S. 4547 - 4561. ROCKVILLE: AMER SOC PLANT BIOLOGISTS. ISSN 1532-298X

Babu, Vipin ORCID: 0000-0002-0001-8783, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Schumacher, Bjoern (2014). A C. elegans homolog of the Cockayne syndrome complementation group A gene. DNA Repair, 24. S. 57 - 63. AMSTERDAM: ELSEVIER. ISSN 1568-7856

Kajava, Andrey V., Klopffleisch, Karsten ORCID: 0000-0002-6977-1386, Chen, Shuhua and Hofmann, Kay ORCID: 0000-0002-2289-9083 (2014). Evolutionary link between metazoan RHIM motif and prion-forming domain of fungal heterokaryon incompatibility factor HET-s/HET-s. Sci Rep, 4. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Madsen, Louise, Molbaek, Karen, Larsen, Ida B., Nielsen, Sofie V., Poulsen, Esben G., Walmod, Peter S., Hofmann, Kay ORCID: 0000-0002-2289-9083, Seeger, Michael, Chien, Chen-Ying, Chen, Rey-Huei ORCID: 0000-0002-6006-2137, Kriegenburg, Franziska and Hartmann-Petersen, Rasmus ORCID: 0000-0002-4155-7791 (2014). Human ASPL/TUG interacts with p97 and complements the proteasome mislocalization of a yeast ubx4 mutant, but not the ER-associated degradation defect. BMC Cell Biol., 15. LONDON: BMC. ISSN 1471-2121

Lessel, Davor ORCID: 0000-0003-4496-244X, Vaz, Bruno, Halder, Swagata, Lockhart, Paul J., Marinovic-Terzic, Ivana, Lopez-Mosqueda, Jaime, Philipp, Melanie ORCID: 0000-0003-2714-965X, Sim, Joe C. H., Smith, Katherine R., Oehler, Judith, Cabrera, Elisa, Freire, Raimundo ORCID: 0000-0003-4473-8894, Pope, Kate, Nahid, Amsha, Norris, Fiona, Leventer, Richard J., Delatycki, Martin B., Barbi, Gotthold, von Ameln, Simon ORCID: 0000-0002-2242-3165, Hoegel, Josef, Degoricija, Marina ORCID: 0000-0001-7023-9381, Fertig, Regina, Burkhalter, Martin D., Hofmann, Kay ORCID: 0000-0002-2289-9083, Thiele, Holger, Altmueller, Janine, Nuernberg, Gudrun, Nuernberg, Peter, Bahlo, Melanie ORCID: 0000-0001-5132-0774, Martin, George M., Aalfs, Cora M., Oshima, Junko, Terzic, Janos, Amor, David J., Dikic, Ivan ORCID: 0000-0001-8156-9511, Ramadan, Kristijan and Kubisch, Christian ORCID: 0000-0003-4220-0978 (2014). Mutations in SPRTN cause early onset hepatocellular carcinoma, genomic instability and progeroid features. Nature Genet., 46 (11). S. 1239 - 1245. NEW YORK: NATURE PUBLISHING GROUP. ISSN 1546-1718

Kazlauskaite, Agne, Kondapalli, Chandana, Gourlay, Robert, Campbell, David G., Ritorto, Maria Stella ORCID: 0000-0001-9861-6863, Hofmann, Kay ORCID: 0000-0002-2289-9083, Alessi, Dario R., Knebel, Axel, Trost, Matthias ORCID: 0000-0002-5732-700X and Muqit, Miratul M. K. (2014). Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser(65). Biochem. J., 460. S. 127 - 140. LONDON: PORTLAND PRESS LTD. ISSN 1470-8728

Finger, Yannik, Habich, Markus, Gerlich, Sarah, Urbanczyk, Sophia, van de Logt, Erik, Koch, Julian ORCID: 0000-0001-7829-3411, Schu, Laura, Lapacz, Kim Jasmin, Ali, Muna, Petrungaro, Carmelina, Salscheider, Silja Lucia, Pichlo, Christian, Baumann, Ulrich, Mielenz, Dirk, Dengjel, Joern, Brachvogel, Bent, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Riemer, Jan . Proteasomal degradation induced by DPP9-mediated processing competes with mitochondrial protein import. Embo J.. HOBOKEN: WILEY. ISSN 1460-2075