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2022
Erven, Ilka ORCID: 0000-0002-1095-6861, Abraham, Elena, Hermanns, Thomas ORCID: 0000-0001-5350-7479, Baumann, Ulrich and Hofmann, Kay (2022). A widely distributed family of eukaryotic and bacterial deubiquitinases related to herpesviral large tegument proteins. Nat. Commun., 13 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723
Hermanns, Thomas ORCID: 0000-0001-5350-7479, Pichlo, Christian ORCID: 0000-0002-3156-5667, Baumann, Ulrich and Hofmann, Kay (2022). A structural basis for the diverse linkage specificities within the ZUFSP deubiquitinase family. Nat. Commun., 13 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723
Jia, Aolin, Huang, Shijia, Song, Wen ORCID: 0000-0002-9498-2409, Wang, Junli ORCID: 0000-0001-8825-3894, Meng, Yonggang, Sun, Yue, Xu, Lina, Laessle, Henriette, Jirschitzka, Jan ORCID: 0000-0003-1007-4700, Hou, Jiao ORCID: 0000-0002-2945-1791, Zhang, Tiantian, Yu, Wenquan ORCID: 0000-0002-3711-0006, Hessler, Giuliana, Li, Ertong, Ma, Shoucai, Yu, Dongli, Gebauer, Jan ORCID: 0000-0002-3989-4748, Baumann, Ulrich, Liu, Xiaohui, Han, Zhifu, Chang, Junbiao, Parker, Jane E. and Chai, Jijie (2022). TIR-catalyzed ADP-ribosylation reactions produce signaling molecules for plant immunity. Science, 377 (6605). S. 488 - 497. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE. ISSN 1095-9203
Kroef, Virginia ORCID: 0000-0003-3695-911X, Ruegenberg, Sabine ORCID: 0000-0001-5292-9610, Horn, Moritz, Allmeroth, Kira ORCID: 0000-0002-2659-6776, Ebert, Lena, Bozkus, Seyma, Miethe, Stephan, Elling, Ulrich, Schermer, Bernhard ORCID: 0000-0002-5194-9000, Baumann, Ulrich and Denzel, Martin Sebastian (2022). GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway. eLife, 11. CAMBRIDGE: eLIFE SCIENCES PUBL LTD. ISSN 2050-084X
2021
Abraham, Elena T., Oecal, Sinan, Morgelin, Matthias, Schmid, Philipp W. N., Buchner, Johannes ORCID: 0000-0003-1282-7737, Baumann, Ulrich and Gebauer, Jan M. (2021). Collagen's primary structure determines collagen:HSP47 complex stoichiometry. J. Biol. Chem., 297 (6). AMSTERDAM: ELSEVIER. ISSN 1083-351X
Ruegenberg, Sabine, Mayr, Felix A. M. C., Atanassov, Ilian, Baumann, Ulrich and Denzel, Martin S. (2021). Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1. Nat. Commun., 12 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723
Syx, Delfien, Ishikawa, Yoshihiro ORCID: 0000-0003-2013-0518, Gebauer, Jan ORCID: 0000-0002-3989-4748, Boudko, Sergei P., Guillemyn, Brecht ORCID: 0000-0001-7194-6651, Van Damme, Tim ORCID: 0000-0002-6424-4421, D'hondt, Sanne, Symoens, Sofie, Nampoothiri, Sheela ORCID: 0000-0002-9575-0722, Gould, Douglas B., Baumann, Ulrich, Bachinger, Hans Peter and Malfait, Fransiska (2021). Aberrant binding of mutant HSP47 affects posttranslational modification of type I collagen and leads to osteogenesis imperfecta. PLoS Genet., 17 (2). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7404
2020
Finger, Yannik, Habich, Markus, Gerlich, Sarah, Urbanczyk, Sophia, van de Logt, Erik, Koch, Julian ORCID: 0000-0001-7829-3411, Schu, Laura, Lapacz, Kim Jasmin, Ali, Muna, Petrungaro, Carmelina, Salscheider, Silja Lucia, Pichlo, Christian, Baumann, Ulrich, Mielenz, Dirk, Dengjel, Joern, Brachvogel, Bent, Hofmann, Kay ORCID: 0000-0002-2289-9083 and Riemer, Jan (2020). Proteasomal degradation induced by DPP9-mediated processing competes with mitochondrial protein import. Embo J., 39 (19). HOBOKEN: WILEY. ISSN 1460-2075
Gebauer, Jan M., Flachsenberg, Florian ORCID: 0000-0001-7051-8719, Windler, Cordula, Richer, Barbara, Baumann, Ulrich and Seeger, Karsten (2020). Structural and biophysical characterization of the type VII collagen vWFA2 subdomain leads to identification of two binding sites. FEBS Open Bio, 10 (4). S. 580 - 593. HOBOKEN: WILEY. ISSN 2211-5463
Koehler, Anna, Morgelin, Matthias, Gebauer, Jan M., Oecal, Sinan, Imhof, Thomas, Koch, Manuel, Nagata, Kazuhiro, Paulsson, Mats, Zaucke, Frank, Baumann, Ulrich and Sengle, Gerhard (2020). New specific HSP47 functions in collagen subfamily chaperoning. Faseb J., 34 (9). S. 12040 - 12053. HOBOKEN: WILEY. ISSN 1530-6860
Maassen, Andreas ORCID: 0000-0002-1446-0994, Gebauer, Jan M., Abraham, Elena Theres, Grimm, Isabelle, Neudoerfl, Joerg-Martin, Kuehne, Ronald, Neundorf, Ines ORCID: 0000-0001-6450-3991, Baumann, Ulrich and Schmalz, Hans-Guenther ORCID: 0000-0003-0489-1827 (2020). Triple-Helix-Stabilizing Effects in Collagen Model Peptides Containing PPII-Helix-Preorganized Diproline Modules. Angew. Chem.-Int. Edit., 59 (14). S. 5747 - 5756. WEINHEIM: WILEY-V C H VERLAG GMBH. ISSN 1521-3773
Ruegenberg, Sabine, Horn, Moritz ORCID: 0000-0002-5324-7256, Pichlo, Christian ORCID: 0000-0002-3156-5667, Allmeroth, Kira, Baumann, Ulrich and Denzel, Martin S. (2020). Loss of GFAT-1 feedback regulation activates the hexosamine pathway that modulates protein homeostasis. Nat. Commun., 11 (1). LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723
Solomon-Degefa, Herimela, Gebauer, Jan M., Jeffries, Cy M., Freiburg, Carolin D., Meckelburg, Patrick, Bird, Louise E., Baumann, Ulrich, Svergun, Dmitri I., Owens, Raymond J., Werner, Jorn M., Behrmann, Elmar, Paulsson, Mats and Wagener, Raimund (2020). Structure of a collagen VI alpha 3 chain VWA domain array: adaptability and functional implications of myopathy causing mutations. J. Biol. Chem., 295 (36). S. 12755 - 12772. ROCKVILLE: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
2019
Baumann, Ulrich (2019). Structure-Function Relationships of the Repeat Domains of RTX Toxins. Toxins, 11 (11). BASEL: MDPI. ISSN 2072-6651
Fragel, Susann M., Montada, Anna, Heermann, Ralf ORCID: 0000-0003-0631-6156, Baumann, Ulrich, Schacherl, Magdalena ORCID: 0000-0002-5478-2509 and Schnetz, Karin ORCID: 0000-0003-4693-6202 (2019). Characterization of the pleiotropic LysR-type transcription regulator LeuO of Escherichia coli. Nucleic Acids Res., 47 (14). S. 7363 - 7380. OXFORD: OXFORD UNIV PRESS. ISSN 1362-4962
Luxenburger, Andreas ORCID: 0000-0002-7574-8027, Schmidt, Dorian, Ianes, Chiara, Pichlo, Christian ORCID: 0000-0002-3156-5667, Krueger, Marc, von Drathen, Thorsten, Brunstein, Elena, Gainsford, Graeme J., Baumann, Ulrich, Knippschild, Uwe and Peifer, Christian (2019). Design, Synthesis and Biological Evaluation of Isoxazole-Based CK1 Inhibitors Modified with Chiral Pyrrolidine Scaffolds. Molecules, 24 (5). BASEL: MDPI. ISSN 1420-3049
Pichlo, Christian, Juetten, Linda, Wojtalla, Fabian, Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Diaz, Dolores ORCID: 0000-0002-2406-4952 and Baumann, Ulrich (2019). Molecular determinants of the mechanism and substrate specificity of Clostridium difficile proline-proline endopeptidase-1. J. Biol. Chem., 294 (30). S. 11525 - 11536. ROCKVILLE: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
Schehr, Miriam, Ianes, Chiara, Weisner, Joern, Heintze, Linda, Mueller, Matthias P., Pichlo, Christian, Charl, Julia, Brunstein, Elena, Ewert, Julia, Lehr, Marc, Baumann, Ulrich, Rauh, Daniel, Knippschild, Uwe, Peifer, Christian and Herges, Rainer (2019). 2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach. Photochem. Photobiol. Sci., 18 (6). S. 1398 - 1408. CAMBRIDGE: ROYAL SOC CHEMISTRY. ISSN 1474-9092
2018
Arefyeva, Natalia, Sandleben, Aaron ORCID: 0000-0002-4141-7406, Krest, Alexander, Baumann, Ulrich, Schaefer, Mathias, Kempf, Maxim and Klein, Axel (2018). [2 x 2] Molecular Grids of Ni(II) and Zn(II) with Redox-Active 1,4-Pyrazine-Bis(thiosemicarbazone) Ligands. Inorganics, 6 (2). BASEL: MDPI. ISSN 2304-6740
Chakkalakal, Salin A., Heilig, Juliane, Baumann, Ulrich, Paulsson, Mats and Zaucke, Frank ORCID: 0000-0002-7680-9354 (2018). Impact of Arginine to Cysteine Mutations in Collagen II on Protein Secretion and Cell Survival. Int. J. Mol. Sci., 19 (2). BASEL: MDPI. ISSN 1422-0067
Dolde, Christine, Bischof, Joachim, Gruter, Simon ORCID: 0000-0003-0124-8625, Montada, Anna, Halekotte, Jakob, Peifer, Christian, Kalbacher, Hubert, Baumann, Ulrich, Knippschild, Uwe and Suter, Beat (2018). A CK1 FRET biosensor reveals that DDX3X is an essential activator of CK1 epsilon. J. Cell Sci., 131 (1). CAMBRIDGE: COMPANY BIOLOGISTS LTD. ISSN 1477-9137
Garcia-Reyes, Balbina, Witt, Lydia, Jansen, Bjoern, Karasu, Ebru, Gehring, Tanja, Leban, Johann, Henne-Bruns, Doris, Pichlo, Christian, Brunstein, Elena, Baumann, Ulrich, Wesseler, Fabian, Rathmer, Bernd, Schade, Dennis ORCID: 0000-0002-5515-1821, Peifer, Christian and Knippschild, Uwe (2018). Discovery of Inhibitor of Wnt Production 2 (IWP-2) and Related Compounds As Selective ATP-Competitive Inhibitors of Casein Kinase 1 (CK1) delta/epsilon. J. Med. Chem., 61 (9). S. 4087 - 4103. WASHINGTON: AMER CHEMICAL SOC. ISSN 1520-4804
Gebauer, Jan M., Koehler, Anna, Dietmar, Helen, Gompert, Monika, Neundorf, Ines ORCID: 0000-0001-6450-3991, Zaucke, Frank ORCID: 0000-0002-7680-9354, Koch, Manuel and Baumann, Ulrich (2018). COMP and TSP-4 interact specifically with the novel GXKGHR motif only found in fibrillar collagens. Sci Rep, 8. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322
Hermanns, Thomas ORCID: 0000-0001-5350-7479, Pichlo, Christian ORCID: 0000-0002-3156-5667, Woiwode, Ilka, Klopffleisch, Karsten ORCID: 0000-0002-6977-1386, Witting, Katharina F., Ovaa, Huib ORCID: 0000-0002-0068-054X, Baumann, Ulrich and Hofmann, Kay (2018). A family of unconventional deubiquitinases with modular chain specificity determinants. Nat. Commun., 9. BERLIN: NATURE RESEARCH. ISSN 2041-1723
Lange, Jacqueline, Demir, Fatih ORCID: 0000-0002-5744-0205, Huesgen, Pitter F., Baumann, Ulrich, von Elert, Eric ORCID: 0000-0001-7758-716X and Pichlo, Christian ORCID: 0000-0002-3156-5667 (2018). Heterologous expression and characterization of a novel serine protease from Daphnia magna: A possible role in susceptibility to toxic cyanobacteria. Aquat. Toxicol., 205. S. 140 - 148. AMSTERDAM: ELSEVIER SCIENCE BV. ISSN 1879-1514
Pichlo, Christian ORCID: 0000-0002-3156-5667, Toelzer, Christine ORCID: 0000-0001-9984-5940, Chojnacki, Konrad ORCID: 0000-0002-9285-0904, Oecal, Sinan, Uthoff, Matthias ORCID: 0000-0002-6477-5505, Ruegenberg, Sabine, Hermanns, Thomas ORCID: 0000-0001-5350-7479, Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Denzel, Martin S., Hofmann, Kay, Niefind, Karsten ORCID: 0000-0002-0183-6315 and Baumann, Ulrich (2018). Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer. Acta Crystallogr. F-Struct. Biol. Commun., 74. S. 307 - 315. CHESTER: INT UNION CRYSTALLOGRAPHY. ISSN 2053-230X
Uthoff, Matthias and Baumann, Ulrich (2018). Conformational Flexibility of Pore Loop-1 Gives Insights into Substrate Translocation by AAA plus Protease FtsH. Protein Sci., 27. S. 79 - 81. HOBOKEN: WILEY. ISSN 1469-896X
Uthoff, Matthias and Baumann, Ulrich (2018). Conformational flexibility of pore loop-1 gives insights into substrate translocation by AAA plus protease FtsH. Acta Crystallogr. Sect. A, 74. S. A89 - 1. CHESTER: INT UNION CRYSTALLOGRAPHY. ISSN 2053-2733
Uthoff, Matthias and Baumann, Ulrich (2018). Conformational flexibility of pore loop-1 gives insights into substrate translocation by the AAA(+) protease FtsH. J. Struct. Biol., 204 (2). S. 199 - 207. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1095-8657
2017
Cauble, Meagan ORCID: 0000-0002-1481-8642, Yang, Phillip, Baumann, Ulrich, Gebauer, Jan M., Orr, Bradford G., Duong, Le T. and Holl, Mark M. Banaszak (2017). Microstructure dependent binding of pigment epithelium derived factor (PEDF) to type I collagen fibrils. J. Struct. Biol., 199 (2). S. 132 - 140. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. ISSN 1095-8657
Halekotte, Jakob, Witt, Lydia, Ianes, Chiara, Krueger, Marc, Buehrmann, Mike, Rauh, Daniel, Pichlo, Christian, Brunstein, Elena, Luxenburger, Andreas ORCID: 0000-0002-7574-8027, Baumann, Ulrich, Knippschild, Uwe, Bischof, Joachim and Peifer, Christian (2017). Optimized 4,5-Diarylimidazoles as Potent/Selective Inhibitors of Protein Kinase CK1 delta and Their Structural Relation to p38 alpha MAPK. Molecules, 22 (4). BASEL: MDPI AG. ISSN 1420-3049
Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Gompert, Monika, Pardon, Els, Lamkemeyer, Tobias, Steyaert, Jan ORCID: 0000-0002-3825-874X and Baumann, Ulrich (2017). Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease. Biochim. Biophys. Acta-Biomembr., 1859 (10). S. 1859 - 1872. AMSTERDAM: ELSEVIER. ISSN 1879-2642
2016
Knyphausen, Philipp, de Boor, Susanne, Kuhlmann, Nora, Scislowski, Lukas, Extra, Antje, Baldus, Linda, Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Baumann, Ulrich, Neundorf, Ines ORCID: 0000-0001-6450-3991 and Lammers, Michael ORCID: 0000-0003-4168-4640 (2016). Insights into Lysine Deacetylation of Natively Folded Substrate Proteins by Sirtuins. J. Biol. Chem., 291 (28). S. 14677 - 14695. BETHESDA: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
Kuhlmann, Nora, Wroblowski, Sarah, Knyphausen, Philipp, de Boor, Susanne, Brenig, Julian, Zienert, Anke Y., Meyer-Teschendorf, Katrin, Praefcke, Gerrit J. K., Nolte, Hendrik, Krueger, Marcus ORCID: 0000-0003-2008-4582, Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Baumann, Ulrich, James, Leo C., Chin, Jason W. and Lammers, Michael ORCID: 0000-0003-4168-4640 (2016). Structural and Mechanistic Insights into the Regulation of the Fundamental Rho Regulator RhoGDI by Lysine Acetylation. J. Biol. Chem., 291 (11). S. 5484 - 5500. BETHESDA: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
Oecal, Sinan, Socher, Eileen ORCID: 0000-0002-6239-3749, Uthoff, Matthias ORCID: 0000-0002-6477-5505, Ernst, Corvin, Zaucke, Frank, Sticht, Heinrich ORCID: 0000-0001-5644-045X, Baumann, Ulrich and Gebauer, Jan M. (2016). The pH-dependent Client Release from the Collagen-specific Chaperone HSP47 Is Triggered by a Tandem Histidine Pair. J. Biol. Chem., 291 (24). S. 12612 - 12627. BETHESDA: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
Pichlo, Christian, Montada, Angelika A., Schacherl, Magdalena ORCID: 0000-0002-5478-2509 and Baumann, Ulrich (2016). Production, Crystallization and Structure Determination of C. difficile PPEP-1 via Microseeding and Zinc-SAD. J. Vis. Exp. (118). CAMBRIDGE: JOURNAL OF VISUALIZED EXPERIMENTS. ISSN 1940-087X
Schacherl, Magdalena ORCID: 0000-0002-5478-2509 and Baumann, Ulrich (2016). Feeding Anthrax: The Crystal Structure of Bacillus anthracis InhA Protease. Structure, 24 (1). S. 1 - 3. CAMBRIDGE: CELL PRESS. ISSN 1878-4186
2015
Braeutigam, Maria, Teusch, Nicole ORCID: 0000-0002-9030-1493, Schenk, Tobias, Sheikh, Miriam, Aricioglu, Rocky Z., Borowski, Swantje H., Neudoerfl, Joerg-Martin, Baumann, Ulrich, Griesbeck, Axel G. and Pietsch, Markus (2015). Selective Inhibitors of Glutathione Transferase P1 with Trioxane Structure as Anticancer Agents. ChemMedChem, 10 (4). S. 629 - 640. WEINHEIM: WILEY-V C H VERLAG GMBH. ISSN 1860-7187
Braeutigam, Maria, Teusch, Nicole ORCID: 0000-0002-9030-1493, Schenk, Tobias, Sheikh, Miriam, Aricioglu, Rocky Z., Borowski, Swantje H., Neudoerfl, Joerg-Martin, Baumann, Ulrich, Griesbeck, Axel G. and Pietsch, Markus (2015). Selective Inhibitors of Glutathione Transferase P1 with Trioxane Structure as Anticancer Agents. ChemMedChem, 10 (4). S. 629 - 640. WEINHEIM: WILEY-V C H VERLAG GMBH. ISSN 1860-7187
Brenig, Julian, de Boor, Susanne, Knyphausen, Philipp, Kuhlmann, Nora, Wroblowski, Sarah, Baldus, Linda, Scislowski, Lukas, Artz, Oliver, Trauschies, Philip, Baumann, Ulrich, Neundorf, Ines ORCID: 0000-0001-6450-3991 and Lammers, Michael ORCID: 0000-0003-4168-4640 (2015). Structural and Biochemical Basis for the Inhibitory Effect of Liprin-alpha 3 on Mouse Diaphanous 1 (mDia1) Function. J. Biol. Chem., 290 (23). S. 14314 - 14328. BETHESDA: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X
Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Montada, Angelika A. M., Brunstein, Elena and Baumann, Ulrich (2015). The first crystal structure of the peptidase domain of the U32 peptidase family. Acta Crystallogr. Sect. D-Struct. Biol., 71. S. 2505 - 2513. CHESTER: INT UNION CRYSTALLOGRAPHY. ISSN 2059-7983
Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Pichlo, Christian, Neundorf, Ines ORCID: 0000-0001-6450-3991 and Baumann, Ulrich (2015). Structural Basis of Proline-Proline Peptide Bond Specificity of the Metalloprotease Zmp1 Implicated in Motility of Clostridium difficile. Structure, 23 (9). S. 1632 - 1643. CAMBRIDGE: CELL PRESS. ISSN 1878-4186
Vostrukhina, Marina, Popov, Alexander ORCID: 0000-0002-3058-8912, Brunstein, Elena, Lanz, Martin A., Baumgartner, Renato, Bieniossek, Christoph, Schacherl, Magdalena ORCID: 0000-0002-5478-2509 and Baumann, Ulrich (2015). The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C-2-symmetric hexamer. Acta Crystallogr. Sect. D-Struct. Biol., 71. S. 1307 - 1319. CHESTER: INT UNION CRYSTALLOGRAPHY. ISSN 2059-7983
2013
Schacherl, Magdalena ORCID: 0000-0002-5478-2509, Waltersperger, Sandro and Baumann, Ulrich (2013). Structural characterization of the ribonuclease H-like type ASKHA superfamily kinase MK0840 from Methanopyrus kandleri. Acta Crystallogr. Sect. D-Struct. Biol., 69. S. 2440 - 2451. CHESTER: INT UNION CRYSTALLOGRAPHY. ISSN 2059-7983
2012
Stubbs, Milton T. and Baumann, Ulrich (2012). No end in sight: the development of protein crystallography in Martinsried. Biol. Chem., 393 (10). S. 1025 - 1027. BERLIN: WALTER DE GRUYTER & CO. ISSN 1431-6730