Universität zu Köln

Journal Article

Brant, Lilija, Georgomanolis, Theodore, Nikolic, Milos ORCID: 0000-0003-0029-7601, Brackley, Chris A., Kolovos, Petros ORCID: 0000-0002-0787-6158, van Ijcken, Wilfred, Grosveld, Frank G., Marenduzzo, Davide ORCID: 0000-0003-3974-4915 and Papantonis, Argyris ORCID: 0000-0001-7551-1073 (2016). Exploiting native forces to capture chromosome conformation in mammalian cell nuclei. Mol. Syst. Biol., 12 (12). HOBOKEN: WILEY. ISSN 1744-4292

Brant, Lilija and Papantonis, Argyris (2015). Contribution of 3D Chromatin Architecture to the Maintenance of Pluripotency. Curr. Stem. Cell Rep., 1 (3). S. 170 - 176. HEIDELBERG: SPRINGER HEIDELBERG. ISSN 2198-7866

Frank, Stefan, Ahuja, Gaurav ORCID: 0000-0002-2837-9361, Bartsch, Deniz, Russ, Nicole, Yao, Wenjie, Kuo, Joseph Chao-Chung, Derks, Jens-Peter, Akhade, Vijay Suresh, Kargapolova, Yulia, Georgomanolis, Theodore, Messling, Jan-Erik ORCID: 0000-0003-3843-0041, Gramm, Marie, Brant, Lilija, Rehimi, Rizwan, Vargas, Natalia Emilse, Kuroczik, Alina, Yang, Tsun-Po, Sahito, Raja Ghazanfar Ali, Franzen, Julia, Hescheler, Juergen, Sachinidis, Agapios, Peifer, Martin, Rada-Iglesias, Alvaro ORCID: 0000-0001-7137-1341, Kanduri, Meena, Costa, Ivan G. ORCID: 0000-0003-2890-8697, Kanduri, Chandrasekhar, Papantonis, Argyris ORCID: 0000-0001-7551-1073 and Kurian, Leo ORCID: 0000-0001-7466-5169 (2019). yylncT Defines a Class of Divergently Transcribed lncRNAs and Safeguards the T-mediated Mesodermal Commitment of Human PSCs. Cell Stem Cell, 24 (2). S. 318 - 336. CAMBRIDGE: CELL PRESS. ISSN 1875-9777

Franzen, Julia ORCID: 0000-0002-2459-5841, Georgomanolis, Theodoros, Selich, Anton, Kuo, Chao-Chung ORCID: 0000-0001-8879-4754, Stoeger, Reinhard, Brant, Lilija, Mulabdic, Melita Sara, Fernandez-Rebollo, Eduardo, Grezella, Clara, Ostrowska, Alina, Begemann, Matthias, Nikolic, Milos, Rath, Bjoern, Ho, Anthony D., Rothe, Michael, Schambach, Axel, Papantonis, Argyris and Wagner, Wolfgang (2021). DNA methylation changes during long-term in vitro cell culture are caused by epigenetic drift. Commun. Biol., 4 (1). BERLIN: NATURE RESEARCH. ISSN 2399-3642

Kolovos, Petros ORCID: 0000-0002-0787-6158, Georgomanolis, Theodore, Koeferle, Anna, Larkin, Joshua D., Brant, Lilija, Nikolic, Milos ORCID: 0000-0003-0029-7601, Gusmao, Eduardo G., Zirkel, Anne, Knoch, Tobias A., van Ijcken, Wilfred F., Cook, Peter R., Costa, Ivan G. ORCID: 0000-0003-2890-8697, Grosveld, Frank G. and Papantonis, Argyris ORCID: 0000-0001-7551-1073 (2016). Binding of nuclear factor kappa B to noncanonical consensus sites reveals its multimodal role during the early inflammatory response. Genome Res., 26 (11). S. 1478 - 1490. COLD SPRING HARBOR: COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT. ISSN 1549-5469

Melnik, Svitlana, Caudron-Herger, Maiwen ORCID: 0000-0002-7030-8153, Brant, Lilija, Carr, Ian M., Rippe, Karsten ORCID: 0000-0001-9951-9395, Cook, Peter R. and Papantonis, Argyris ORCID: 0000-0001-7551-1073 (2016). Isolation of the protein and RNA content of active sites of transcription from mammalian cells. Nat. Protoc., 11 (3). S. 553 - 566. LONDON: NATURE PUBLISHING GROUP. ISSN 1750-2799

Weiterer, Sinah-Sophia, Meier-Soelch, Johanna, Georgomanolis, Theodore, Mizi, Athanasia ORCID: 0000-0002-4313-491X, Beyerlein, Anna, Weiser, Hendrik, Brant, Lilija, Mayr-Buro, Christin, Jurida, Liane, Beuerlein, Knut, Mueller, Helmut, Weber, Axel, Tenekeci, Ulas, Dittrich-Breiholz, Oliver, Bartkuhn, Marek, Nist, Andrea, Stiewe, Thorsten ORCID: 0000-0003-0134-7826, van IJcken, Wilfred F. J., Riedlinger, Tabea, Schmitz, M. Lienhard ORCID: 0000-0002-6984-7192, Papantonis, Argyris ORCID: 0000-0001-7551-1073 and Kracht, Michael (2020). Distinct IL-1 alpha-responsive enhancers promote acute and coordinated changes in chromatin topology in a hierarchical manner. Embo J., 39 (1). HOBOKEN: WILEY. ISSN 1460-2075

Zirkel, Anne, Nikolic, Milos ORCID: 0000-0003-0029-7601, Sofiadis, Konstantinos, Mallm, Jan-Philipp, Brackley, Chris A., Gothe, Henrike, Drechsel, Oliver, Becker, Christian, Altmueller, Janine, Josipovic, Natasa, Georgomanolis, Theodore, Brant, Lilija, Franzen, Julia, Koker, Mirjam, Gusmao, Eduardo G., Costa, Ivan G. ORCID: 0000-0003-2890-8697, Ullrich, Roland T., Wagner, Wolfgang ORCID: 0000-0002-1971-3217, Roukos, Vassilis ORCID: 0000-0002-5065-3937, Nuernberg, Peter, Marenduzzo, Davide ORCID: 0000-0003-3974-4915, Rippe, Karsten ORCID: 0000-0001-9951-9395 and Papantonis, Argyris ORCID: 0000-0001-7551-1073 (2018). HMGB2 Loss upon Senescence Entry Disrupts Genomic Organization and Induces CTCF Clustering across Cell Types. Mol. Cell, 70 (4). S. 730 - 751. CAMBRIDGE: CELL PRESS. ISSN 1097-4164

Thesis

Brant, Lilija (2018). Exploiting native forces to capture chromosome conformation in mammalian cell nuclei. PhD thesis, Universität zu Köln.