Universität zu Köln

Journal Article

Dall, Elfriede, Stanojlovic, Vesna, Demir, Fatih, Briza, Peter, Dahms, Sven O., Huesgen, Pitter F., Cabrele, Chiara ORCID: 0000-0002-7550-6896 and Brandstetter, Hans ORCID: 0000-0002-6089-3045 (2021). The Peptide Ligase Activity of Human Legumain Depends on Fold Stabilization and Balanced Substrate Affinities. ACS Catal., 11 (19). S. 11885 - 11897. WASHINGTON: AMER CHEMICAL SOC. ISSN 2155-5435

Dall, Elfriede, Zauner, Florian B., Soh, Wai Tuck, Demir, Fatih ORCID: 0000-0002-5744-0205, Dahms, Sven O., Cabrele, Chiara, Huesgen, Pitter F. and Brandstetter, Hans ORCID: 0000-0002-6089-3045 (2020). Structural and functional studies ofArabidopsis thalianalegumain beta reveal isoform specific mechanisms of activation and substrate recognition. J. Biol. Chem., 295 (37). S. 13047 - 13065. ROCKVILLE: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1083-351X

Demir, Fatih ORCID: 0000-0002-5744-0205, Kizhakkedathu, Jayachandran N., Rinschen, Markus M. and Huesgen, Pitter F. (2021). MANTI: Automated Annotation of Protein N-Termini for Rapid Interpretation of N-Terminome Data Sets. Anal. Chem., 93 (13). S. 5596 - 5606. WASHINGTON: AMER CHEMICAL SOC. ISSN 1520-6882

Demir, Fatih ORCID: 0000-0002-5744-0205, Troldborg, Anne ORCID: 0000-0002-9501-1268, Thiel, Steffen ORCID: 0000-0002-4817-155X, Lasse, Moritz, Huesgen, Pitter F., Tomas, Nicola M., Wiech, Thorsten and Rinschen, Markus M. (2021). Proteolysis and inflammation of the kidney glomerulus. Cell Tissue Res., 385 (2). S. 489 - 501. NEW YORK: SPRINGER. ISSN 1432-0878

Hatje, Favian A., Wedekind, Uta, Sachs, Wiebke, Loreth, Desiree ORCID: 0000-0003-0827-149X, Reichelt, Julia, Demir, Fatih ORCID: 0000-0002-5744-0205, Kosub, Christopher ORCID: 0000-0002-7425-4535, Heintz, Lukas ORCID: 0000-0003-1889-0470, Tomas, Nicola M., Huber, Tobias B., Skuza, Sinah, Sachs, Marlies, Zielinski, Stephanie, Rinschen, Markus M. and Meyer-Schwesinger, Catherine (2021). Tripartite Separation of Glomerular Cell Types and Proteomes from Reporter-Free Mice. J. Am. Soc. Nephrol., 32 (9). S. 2176 - 2195. WASHINGTON: AMER SOC NEPHROLOGY. ISSN 1533-3450

Hofsetz, Eduard ORCID: 0000-0001-5830-4566, Demir, Fatih ORCID: 0000-0002-5744-0205, Szczepanowska, Karolina ORCID: 0000-0003-4689-2350, Kukat, Alexandra, Kizhakkedathu, Jayachandran N., Trifunovic, Aleksandra and Huesgen, Pitter F. (2020). The Mouse Heart Mitochondria N Terminome Provides Insights into ClpXP-Mediated Proteolysis. Mol. Cell. Proteomics, 19 (8). S. 1330 - 1346. ROCKVILLE: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1535-9484

Hutzfeldt, Arvid D., Tan, Yifan ORCID: 0000-0002-7322-297X, Bonin, Lena Lydie, Beck, Bodo B., Baumbach, Jan ORCID: 0000-0002-0282-0462, Lass, Moritz, Demir, Fatih ORCID: 0000-0002-5744-0205 and Rinschen, Markus M. (2022). Consensus draft of the native mouse podocyte-ome. Am. J. Physiol.-Renal Physiol., 323 (2). S. F182 - 16. Rockville: AMER PHYSIOLOGICAL SOC. ISSN 1522-1466

Lange, Jacqueline, Demir, Fatih ORCID: 0000-0002-5744-0205, Huesgen, Pitter F., Baumann, Ulrich, von Elert, Eric ORCID: 0000-0001-7758-716X and Pichlo, Christian ORCID: 0000-0002-3156-5667 (2018). Heterologous expression and characterization of a novel serine protease from Daphnia magna: A possible role in susceptibility to toxic cyanobacteria. Aquat. Toxicol., 205. S. 140 - 148. AMSTERDAM: ELSEVIER SCIENCE BV. ISSN 1879-1514

Mielke, Kati, Wagner, Raik, Mishra, Laxmi S., Demir, Fatih ORCID: 0000-0002-5744-0205, Perrar, Andreas ORCID: 0000-0003-3365-5575, Huesgen, Pitter F. and Funk, Christiane ORCID: 0000-0002-7897-4038 (2021). Abundance of metalloprotease FtsH12 modulates chloroplast development in Arabidopsis thaliana. J. Exp. Bot., 72 (9). S. 3455 - 3474. OXFORD: OXFORD UNIV PRESS. ISSN 1460-2431

Passarge, Andrea, Demir, Fatih ORCID: 0000-0002-5744-0205, Green, Kimberly, Depotter, Jasper R. L., Scott, Barry ORCID: 0000-0002-2224-2946, Huesgen, Pitter F., Doehlemann, Gunther ORCID: 0000-0002-7353-8456 and Misas Villamil, Johana C. (2021). Host apoplastic cysteine protease activity is suppressed during the mutualistic association of Lolium perenne and Epichloe festucae. J. Exp. Bot., 72 (9). S. 3410 - 3427. OXFORD: OXFORD UNIV PRESS. ISSN 1460-2431

Rinschen, Markus M., Harder, Jennifer L., Carter-Timofte, Madalina E., Rodriguez, Luis Zanon, Mirabelli, Carmen, Demir, Fatih ORCID: 0000-0002-5744-0205, Kurmasheva, Naziia ORCID: 0000-0002-9609-5811, Ramakrishnan, Suresh K., Kunke, Madlen, Tan, Yifan, Billing, Anja, Dahlke, Eileen, Larionov, Alexey A., Bechtel-Walz, Wibke, Aukschun, Ute, Grabbe, Marlen, Nielsen, Rikke, Christensen, Erik I., Kretzler, Matthias, Huber, Tobias B., Wobus, Christiane E., Olagnier, David ORCID: 0000-0001-6912-0674, Siuzdak, Gary, Grahammer, Florian and Theilig, Franziska (2022). VPS34-dependent control of apical membrane function of proximal tubule cells and nutrient recovery by the kidney. Sci. Signal., 15 (762). WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE. ISSN 1937-9145

Rinschen, Markus M., Hoppe, Ann-Kathrin, Grahammer, Florian, Kann, Martin, Voelker, Linus A., Schurek, Eva-Maria, Binz, Julie, Hoehne, Martin, Demir, Fatih ORCID: 0000-0002-5744-0205, Malisic, Milena, Huber, Tobias B. ORCID: 0000-0001-7175-5062, Kurschat, Christine, Kizhakkedathu, Jayachandran N., Schermer, Bernhard ORCID: 0000-0002-5194-9000, Huesgen, Pitter F. and Benzing, Thomas (2017). N-Degradomic Analysis Reveals a Proteolytic Network Processing the Podocyte Cytoskeleton. J. Am. Soc. Nephrol., 28 (10). S. 2867 - 2879. WASHINGTON: AMER SOC NEPHROLOGY. ISSN 1533-3450

Rinschen, Markus M., Palygin, Oleg, El-Meanawy, Ashraf, Domingo-Almenara, Xavier ORCID: 0000-0002-0133-6863, Palermo, Amelia, Dissanayake, Lashodya, V, Golosova, Daria ORCID: 0000-0002-9663-9639, Schafroth, Michael A., Guijas, Carlos, Demir, Fatih ORCID: 0000-0002-5744-0205, Jaegers, Johannes, Gliozzi, Megan L., Xue, Jingchuan, Hoehne, Martin, Benzing, Thomas ORCID: 0000-0003-0512-1066, Kok, Bernard P., Saez, Enrique, Bleich, Markus ORCID: 0000-0002-1745-2295, Himmerkus, Nina, Weisz, Ora A., Cravatt, Benjamin F., Krueger, Marcus, Benton, H. Paul, Siuzdak, Gary and Staruschenko, Alexander (2022). Accelerated lysine metabolism conveys kidney protection in salt-sensitive hypertension. Nat. Commun., 13 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723

Soh, Wai Tuck ORCID: 0000-0003-0082-7983, Demir, Fatih ORCID: 0000-0002-5744-0205, Dall, Elfriede ORCID: 0000-0002-0823-8983, Perrar, Andreas ORCID: 0000-0003-3365-5575, Dahms, Sven O., Kuppusamy, Maithreyan ORCID: 0000-0001-6866-0417, Brandstetter, Hans ORCID: 0000-0002-6089-3045 and Huesgen, Pitter F. (2020). ExteNDing Proteome Coverage with Legumain as a Highly Specific Digestion Protease. Anal. Chem., 92 (4). S. 2961 - 2972. WASHINGTON: AMER CHEMICAL SOC. ISSN 1520-6882

Spaeth, Martin R., Bartram, Malte P., Palacio-Escat, Nicolas ORCID: 0000-0002-7022-1437, Hoyer, K. Johanna R., Debes, Cedric, Demir, Fatih ORCID: 0000-0002-5744-0205, Schroeter, Christina B., Mandel, Amrei M., Grundmann, Franziska, Ciarimboli, Giuliano, Beyer, Andreas ORCID: 0000-0002-3891-2123, Kizhakkedathu, Jayachandran N., Brodesser, Susanne, Goebel, Heike, Becker, Jan U., Benzing, Thomas, Schermer, Bernhard ORCID: 0000-0002-5194-9000, Hoehne, Martin, Burst, Volker, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Huesgen, Pitter F., Mueller, Roman-Ulrich and Rinschen, Markus M. (2019). The proteome microenvironment determines the protective effect of preconditioning in cisplatin-induced acute kidney injury. Kidney Int., 95 (2). S. 333 - 350. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1523-1755

Villamil, Johana C. Misas, Mueller, Andre N., Demir, Fatih ORCID: 0000-0002-5744-0205, Meyer, Ute, Oekmen, Bilal, Hueynck, Jan Schulze, Breuer, Marlen, Dauben, Helen, Win, Joe ORCID: 0000-0002-9851-2404, Huesgen, Pitter F. and Doehlemann, Gunther ORCID: 0000-0002-7353-8456 (2019). A fungal substrate mimicking molecule suppresses plant immunity via an inter-kingdom conserved motif. Nat. Commun., 10. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Weng, Samuel S. H., Demir, Fatih ORCID: 0000-0002-5744-0205, Ergin, Enes K., Dirnberger, Sabrina, Uzozie, Anuli, Tuscher, Domenic, Nierves, Lorenz, Tsui, Janice, Huesgen, Pitter F. and Lange, Philipp F. (2019). Sensitive Determination of Proteolytic Proteoforms in Limited Microscale Proteome Samples. Mol. Cell. Proteomics, 18 (11). S. 2335 - 2348. ROCKVILLE: AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC. ISSN 1535-9484