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Journal Article

Johnson, Kim L., Cassin, Andrew M., Lonsdale, Andrew, Wong, Gane Ka-Shu, Soltis, Douglas E., Miles, Nicholas W., Melkonian, Michael, Melkonian, Barbara, Deyholos, Michael K., Leebens-Mack, James ORCID: 0000-0003-4811-2231, Rothfels, Carl J., Stevenson, Dennis W., Graham, Sean W., Wang, Xumin, Wu, Shuangxiu, Pires, J. Chris ORCID: 0000-0001-9682-2639, Edger, Patrick P., Carpenter, Eric J., Bacic, Antony, Doblin, Monika S. and Schultz, Carolyn J. (2017). Insights into the Evolution of Hydroxyproline-Rich Glycoproteins from 1000 Plant Transcriptomes. Plant Physiol., 174 (2). S. 904 - 922. ROCKVILLE: AMER SOC PLANT BIOLOGISTS. ISSN 1532-2548

Johnson, Marc T. J., Carpenter, Eric J., Tian, Zhijian, Bruskiewich, Richard, Burris, Jason N., Carrigan, Charlotte T., Chase, Mark W., Clarke, Neil D., Covshoff, Sarah, dePamphilis, Claude W., Edger, Patrick P., Goh, Falicia ORCID: 0000-0002-8373-7408, Graham, Sean, Greiner, Stephan ORCID: 0000-0003-3369-0354, Hibberd, Julian M., Jordon-Thaden, Ingrid ORCID: 0000-0001-6225-6034, Kutchan, Toni M., Leebens-Mack, James ORCID: 0000-0003-4811-2231, Melkonian, Michael, Miles, Nicholas, Myburg, Henrietta, Patterson, Jordan, Pires, J. Chris ORCID: 0000-0001-9682-2639, Ralph, Paula, Rolf, Megan, Sage, Rowan F., Soltis, Douglas, Soltis, Pamela, Stevenson, Dennis, Stewart, C. Neal, Jr., Surek, Barbara, Thomsen, Christina J. M., Villarreal, Juan Carlos, Wu, Xiaolei, Zhang, Yong, Deyholos, Michael K. and Wong, Gane Ka-Shu (2012). Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes. PLoS One, 7 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1932-6203

Leebens-Mack, James H., Barker, Michael S., Carpenter, Eric J., Deyholos, Michael K., Gitzendanner, Matthew A., Graham, Sean W., Grosse, Ivo, Li, Zheng, Melkonian, Michael, Mirarab, Siavash, Porsch, Martin, Quint, Marcel, Rensing, Stefan A., Soltis, Douglas E., Soltis, Pamela S., Stevenson, Dennis W., Ullrich, Kristian K., Wickett, Norman J., DeGironimo, Lisa, Edger, Patrick P., Jordon-Thaden, Ingrid E., Joya, Steve, Liu, Tao, Melkonian, Barbara, Miles, Nicholas W., Pokorny, Lisa ORCID: 0000-0002-2478-8555, Quigley, Charlotte, Thomas, Philip, Villarreal, Juan Carlos, Augustin, Megan M., Barrett, Matthew D., Baucom, Regina S., Beerling, David J., Benstein, Ruben Maximilian, Biffin, Ed, Brockington, Samuel F., Burge, Dylan O., Burris, Jason N., Burris, Kellie P., Burtet-Sarramegna, Valerie, Caicedo, Ana L., Cannon, Steven B., Cebi, Zehra, Chang, Ying, Chater, Caspar, Cheeseman, John M., Chen, Tao, Clarke, Neil D., Clayton, Harmony, Covshoff, Sarah, Crandall-Stotler, Barbara J., Cross, Hugh, dePamphilis, Claude W., Der, Joshua P., Determann, Ron, Dickson, Rowan C., Di Stilio, Veronica S. ORCID: 0000-0002-6921-3018, Ellis, Shona, Fast, Eva, Feja, Nicole, Field, Katie J., Filatov, Dmitry A., Finnegan, Patrick M., Floyd, Sandra K., Fogliani, Bruno, Garcia, Nicolas ORCID: 0000-0001-9003-1510, Gateble, Gildas ORCID: 0000-0003-2831-6384, Godden, Grant T., Goh, Falicia (Qi Yun), Greiner, Stephan ORCID: 0000-0003-3369-0354, Harkess, Alex, Heaney, James Mike, Helliwell, Katherine E., Heyduk, Karolina, Hibberd, Julian M., Hodel, Richard G. J., Hollingsworth, Peter M., Johnson, Marc T. J., Jost, Ricarda, Joyce, Blake ORCID: 0000-0002-4784-2251, Kapralov, Maxim V., Kazamia, Elena, Kellogg, Elizabeth A., Koch, Marcus A., Von Konrat, Matt, Konyves, Kalman, Kutchan, Toni M., Lam, Vivienne, Larsson, Anders, Leitch, Andrew R., Lentz, Roswitha, Li, Fay-Wei, Lowe, Andrew J., Ludwig, Martha ORCID: 0000-0002-0324-7602, Manos, Paul S., Mavrodiev, Evgeny, McCormick, Melissa K., McKain, Michael, McLellan, Tracy, McNeal, Joel R., Miller, Richard E., Nelson, Matthew N., Peng, Yanhui, Ralph, Paula, Real, Daniel, Riggins, Chance W., Ruhsam, Markus, Sage, Rowan F., Sakai, Ann K., Scascitella, Moira, Schilling, Edward E., Schlosser, Eva-Marie, Sederoff, Heike ORCID: 0000-0002-0960-9678, Servick, Stein, Sessa, Emily B., Shaw, A. Jonathan, Shaw, Shane W., Sigel, Erin M., Skema, Cynthia, Smith, Alison G., Smithson, Ann, Stewart, C. Neal, Jr., Stinchcombe, John R., Szovenyi, Peter, Tate, Jennifer A., Tiebel, Helga, Trapnell, Dorset, Villegente, Matthieu, Wang, Chun-Neng, Weller, Stephen G., Wenzel, Michael, Weststrand, Stina, Westwood, James H., Whigham, Dennis F., Wu, Shuangxiu, Wulff, Adrien S., Yang, Yu, Zhu, Dan, Zhuang, Cuili, Zuidof, Jennifer, Chase, Mark W., Pires, J. Chris, Rothfels, Carl J., Yu, Jun, Chen, Cui, Chen, Li, Cheng, Shifeng, Li, Juanjuan, Li, Ran, Li, Xia, Lu, Haorong, Ou, Yanxiang, Sun, Xiao, Tan, Xuemei, Tang, Jingbo, Tian, Zhijian, Wang, Feng, Wang, Jun, Wei, Xiaofeng, Xu, Xun, Yan, Zhixiang, Yang, Fan, Zhong, Xiaoni, Zhou, Feiyu, Zhu, Ying, Zhang, Yong, Ayyampalayam, Saravanaraj, Barkman, Todd J., Matasci, Naim, Nelson, David R., Sayyari, Erfan, Wafula, Eric K., Walls, Ramona L., Warnow, Tandy, An, Hong, Arrigo, Nils, Baniaga, Anthony E., Galuska, Sally, Jorgensen, Stacy A., Kidder, Thomas I., Kong, Hanghui ORCID: 0000-0003-2721-0449, Lu-Irving, Patricia, Marx, Hannah E., Qi, Xinshuai, Reardon, Chris R., Sutherland, Brittany L., Tiley, George P., Welles, Shana R., Yu, Rongpei, Zhan, Shing, Gramzow, Lydia, Theissen, Gunter and Wong, Gane Ka-Shu ORCID: 0000-0001-6108-5560 (2019). One thousand plant transcriptomes and the phylogenomics of green plants. Nature, 574 (7780). S. 679 - 696. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4687

Li, Fay-Wei ORCID: 0000-0002-0076-0152, Villarreal, Juan Carlos, Kelly, Steven ORCID: 0000-0001-8583-5362, Rothfels, Carl J., Melkonian, Michael, Frangedakis, Eftychios, Ruhsam, Markus ORCID: 0000-0002-8457-345X, Sigel, Erin M., Der, Joshua P., Pittermann, Jarmila, Burge, Dylan O., Pokornyk, Lisa, Larsson, Anders ORCID: 0000-0002-2096-8102, Chen, Tao, Weststrand, Stina, Thomas, Philip, Carpenter, Eric, Zhang, Yong, Tian, Zhijian, Chen, Li, Yan, Zhixiang, Zhu, Ying, Sun, Xiao, Wang, Jun ORCID: 0000-0002-8540-8931, Stevenson, Dennis W., Crandall-Stotler, Barbara J., Shaw, A. Jonathan, Deyholos, Michael K., Soltis, Douglas E., Graham, Sean W., Windham, Michael D., Langdale, Jane A., Wong, Gane Ka-Shu, Mathews, Sarah ORCID: 0000-0002-5518-7541 and Pryer, Kathleen M. ORCID: 0000-0002-9776-6736 (2014). Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns. Proc. Natl. Acad. Sci. U. S. A., 111 (18). S. 6672 - 6678. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Matasci, Naim ORCID: 0000-0003-4416-048X, Hung, Ling-Hong, Yan, Zhixiang, Carpenter, Eric J., Wickett, Norman J., Mirarab, Siavash ORCID: 0000-0001-5410-1518, Warnow, Tandy, Ayyampalayam, Saravanaraj, Barker, Michael, Burleigh, J. Gordon, Gitzendanner, Matthew A., Wafula, Eric, Der, Joshua P., dePamphilis, Claude W., Roure, Beatrice, Philippe, Herve, Ruhfel, Brad R., Miles, Nicholas W., Graham, Sean W., Mathews, Sarah ORCID: 0000-0002-5518-7541, Surek, Barbara, Melkonian, Michael, Soltis, Douglas E., Soltis, Pamela S., Rothfels, Carl, Pokorny, Lisa ORCID: 0000-0002-2478-8555, Shaw, Jonathan A., DeGironimo, Lisa, Stevenson, Dennis W., Villarreal, Juan Carlos, Chen, Tao, Kutchan, Toni M., Rolf, Megan, Baucom, Regina S., Deyholos, Michael K., Samudrala, Ram, Tian, Zhijian, Wu, Xiaolei, Sun, Xiao, Zhang, Yong, Wang, Jun ORCID: 0000-0002-8540-8931, Leebens-Mack, Jim and Wong, Gane Ka-Shu (2014). Data access for the 1,000 Plants (1KP) project. GigaScience, 3. LONDON: BIOMED CENTRAL LTD. ISSN 2047-217X

Wickett, Norman J., Mirarab, Siavash ORCID: 0000-0001-5410-1518, Warnow, Tandy, Carpenter, Eric, Matasci, Naim ORCID: 0000-0003-4416-048X, Ayyampalayam, Saravanaraj, Barker, Michael S., Burleigh, J. Gordon, Gitzendanner, Matthew A., Ruhfel, Brad R., Wafula, Eric, Der, Joshua P., Graham, Sean W., Mathews, Sarah ORCID: 0000-0002-5518-7541, Melkonian, Michael, Soltis, Douglas E., Soltis, Pamela S., Miles, Nicholas W., Rothfels, Carl J., Pokorny, Lisa ORCID: 0000-0002-2478-8555, Shaw, A. Jonathan, DeGironimo, Lisa, Stevenson, Dennis W., Surek, Barbara, Villarreal, Juan Carlos, Roure, Beatrice, Philippe, Herve, dePamphilis, Claude W., Chen, Tao, Deyholos, Michael K., Baucom, Regina S., Kutchan, Toni M., Augustin, Megan M., Wang, Jun ORCID: 0000-0002-8540-8931, Zhang, Yong, Tian, Zhijian, Yan, Zhixiang, Wu, Xiaolei, Sun, Xiao, Wong, Gane Ka-Shu and Leebens-Mack, James ORCID: 0000-0003-4811-2231 (2014). Phylotranscriptomic analysis of the origin and early diversification of land plants. Proc. Natl. Acad. Sci. U. S. A., 111 (45). S. E4859 - 10. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424