Universität zu Köln

2023

Nguyen, Bao-Anh Thi, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Trivedi, Pankaj, Islam, Zahra ORCID: 0000-0001-6965-9549 and Hu, Hang-Wei ORCID: 0000-0002-3294-102X (2023). Plant associated protists-Untapped promising candidates for agrifood tools. Environ. Microbiol., 25 (2). S. 229 - 241. HOBOKEN: WILEY. ISSN 1462-2920

2022

Dumack, Kenneth, Feng, Kai, Flues, Sebastian, Sapp, Melanie, Schreiter, Susanne, Grosch, Rita ORCID: 0000-0002-7179-5715, Rose, Laura E., Deng, Ye, Smalla, Kornelia and Bonkowski, Michael (2022). What Drives the Assembly of Plant-associated Protist Microbiomes? Investigating the Effects of Crop Species, Soil Type and Bacterial Microbiomes. Protist, 173 (6). MUNICH: ELSEVIER GMBH. ISSN 1618-0941

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Ferlian, Olga, Gysi, Deisy Morselli ORCID: 0000-0002-5771-8182, Degrune, Florine, Jauss, Robin-Tobias ORCID: 0000-0002-8285-9155, Walden, Susanne, Oeztoprak, Husna, Wubet, Tesfaye ORCID: 0000-0001-8572-4486, Bonkowski, Michael and Eisenhauer, Nico ORCID: 0000-0002-0371-6720 (2022). Contrasting protist communities (Cercozoa: Rhizaria) in pristine and earthworm-invaded North American deciduous forests. Biol. Invasions, 24 (5). S. 1345 - 1358. DORDRECHT: SPRINGER. ISSN 1573-1464

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Gerdzhikov, Dimitar and Klisarova, Daniela (2022). Phylogenetic analysis confirms the taxonomic placement of the marine flagellate Hermesinum adriaticum (Thecofilosea, Cercozoa, Rhizaria). J. Eukaryot. Microbiol., 69 (3). HOBOKEN: WILEY. ISSN 1550-7408

Dumack, Kenneth, Siemensma, Ferry and Clauss, Steffen (2022). Transfer of the thecate amoebae Lecythium spinosum and Pamphagus armatus to Rhizaspis (Thecofilosea, Cercozoa, Rhizaria). Eur. J. Protistol., 83. MUNICH: ELSEVIER GMBH. ISSN 1618-0429

Freudenthal, Jule ORCID: 0000-0002-1745-9171, Ju, Feng ORCID: 0000-0003-4137-5928, Buergmann, Helmut and Dumack, Kenneth ORCID: 0000-0001-8798-0483 (2022). Microeukaryotic gut parasites in wastewater treatment plants: diversity, activity, and removal. Microbiome, 10 (1). LONDON: BMC. ISSN 2049-2618

Hu, Junwei, Gebremikael, Mesfin Tsegaye, Tytgat, Bjorn, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Hassi, Ummehani, Hosseini, Pezhman Salehi, Sleutel, Steven, Verleyen, Elie and De Neve, Stefaan (2022). Combined selective gamma irradiation and pulverized soil inoculation for ecologically relevant soil microfauna studies. Appl. Soil Ecol., 169. AMSTERDAM: ELSEVIER. ISSN 1873-0272

Roy, Julien ORCID: 0000-0003-2964-1314, Mazel, Florent ORCID: 0000-0003-0572-9901, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Bonkowski, Michael ORCID: 0000-0003-2656-1183 and Rillig, Matthias C. (2022). Hierarchical phylogenetic community assembly of soil protists in a temperate agricultural field. Environ. Microbiol., 24 (11). S. 5498 - 5509. HOBOKEN: WILEY. ISSN 1462-2920

2021

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Sapp, Melanie, von Steimker, Tiemo, Maenz, Anna Tatjana, Rose, Laura Ellen and Bonkowski, Michael (2021). A Call for Research: A Resource of Core Microbial Symbionts of the Arabidopsis thaliana Microbiome Ready and Awaiting Experimental Exploration. Phytobiomes J., 5 (3). S. 362 - 367. ST PAUL: AMER PHYTOPATHOLOGICAL SOC. ISSN 2471-2906

Huang, Xing, Wang, Jianjun ORCID: 0000-0001-7039-7136, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Liu, Weiping ORCID: 0000-0002-1173-892X, Zhang, Qichun, He, Yan ORCID: 0000-0002-1721-7711, Di, Hongjie, Bonkowski, Michael, Xu, Jianming and Li, Yong ORCID: 0000-0003-4038-0493 (2021). Protists modulate fungal community assembly in paddy soils across climatic zones at the continental scale. Soil Biol. Biochem., 160. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 1879-3428

Khanipour Roshan, Samira, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Leinweber, Peter, Karsten, Ulf ORCID: 0000-0002-2955-0757 and Glaser, Karin (2021). Taxonomic and Functional Diversity of Heterotrophic Protists (Cercozoa and Endomyxa) from Biological Soil Crusts. Microorganisms, 9 (2). BASEL: MDPI. ISSN 2076-2607

Pohl, Nina ORCID: 0000-0003-0349-0351, Solbach, Marcel Dominik ORCID: 0000-0001-7073-7428 and Dumack, Kenneth ORCID: 0000-0001-8798-0483 (2021). The wastewater protist Rhogostoma minus (Thecofilosea, Rhizaria) is abundant, widespread, and hosts Legionellales. Water Res., 203. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 1879-2448

Rueger, Lioba, Feng, Kai, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Freudenthal, Jule, Chen, Yan, Sun, Ruibo, Wilson, Monica, Yu, Peng, Sun, Bo, Deng, Ye ORCID: 0000-0002-7584-0632, Hochholdinger, Frank, Vetterlein, Doris and Bonkowski, Michael (2021). Assembly Patterns of the Rhizosphere Microbiome Along the Longitudinal Root Axis of Maize (Zea mays L.). Front. Microbiol., 12. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

Siemensma, Ferry, Holzmann, Maria, Apotheloz-Perret-Gentil, Laure, Clauss, Steffen, Voelcker, Eckhard, Bettighofer, Wolfgang, Roshan, Samira Khanipour, Walden, Susanne ORCID: 0000-0002-7210-7646, Dumack, Kenneth ORCID: 0000-0001-8798-0483 and Pawlowski, Jan ORCID: 0000-0003-2421-388X (2021). Broad sampling of monothalamids (Rhizaria, Foraminifera) gives further insight into diversity of non-marine Foraminifera. Eur. J. Protistol., 77. MUNICH: ELSEVIER GMBH. ISSN 1618-0429

Solbach, Marcel Dominik ORCID: 0000-0001-7073-7428, Bonkowski, Michael and Dumack, Kenneth ORCID: 0000-0001-8798-0483 (2021). Novel Endosymbionts in Rhizarian Amoebae Imply Universal Infection of Unrelated Free-Living Amoebae by Legionellales. Front. Cell. Infect. Microbiol., 11. LAUSANNE: FRONTIERS MEDIA SA. ISSN 2235-2988

Walden, Susanne, Jauss, Robin-Tobias, Feng, Kai ORCID: 0000-0002-9954-570X, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Schaffer, Stefan, Wolf, Ronny, Schlegel, Martin and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2021). On the phenology of protists: recurrent patterns reveal seasonal variation of protistan (Rhizaria: Cercozoa and Endomyxa) communities in tree canopies. FEMS Microbiol. Ecol., 97 (7). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

2020

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Bass, David and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2020). Making sense of environmental sequencing data: Ecologically important functional traits of the protistan groups Cercozoa and Endomyxa (Rhizaria). Mol. Ecol. Resour., 20 (2). S. 398 - 404. HOBOKEN: WILEY. ISSN 1755-0998

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Goerzen, Diana, Gonzalez-Miguens, Ruben, Siemensma, Ferry, Lahr, Daniel J. G., Lara, Enrique ORCID: 0000-0001-8500-522X and Bonkowski, Michael (2020). Molecular investigation of Phryganella acropodia Hertwig et Lesser, 1874 (Arcellinida, Amoebozoa). Eur. J. Protistol., 75. MUNICH: ELSEVIER GMBH. ISSN 1618-0429

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Pundt, Julia and Bonkowski, Michael (2020). Transfer of the Thecate Amoeba Lecythium mutabilis to a Novel Genus Omnivora (Fiscullidae, Thecofilosea, Cercozoa). J. Eukaryot. Microbiol., 67 (2). S. 245 - 252. HOBOKEN: WILEY. ISSN 1550-7408

Dumack, Kenneth and Siemensma, Ferry (2020). Shell Colour in Cercozoa; a Simple Trait to Distinguish Thecofilosea from Imbricatea? Protist, 171 (2). MUNICH: ELSEVIER GMBH. ISSN 1618-0941

Jauss, Robin-Tobias, Walden, Susanne, Fiore-Donno, Anna Maria, Dumack, Kenneth, Schaffer, Stefan, Wolf, Ronny, Schlegel, Martin and Bonkowski, Michael (2020). From Forest Soil to the Canopy: Increased Habitat Diversity Does Not Increase Species Richness of Cercozoa and Oomycota in Tree Canopies. Front. Microbiol., 11. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

Oeztoprak, Huesna, Walden, Susanne, Heger, Thierry ORCID: 0000-0003-3614-0964, Bonkowski, Michael and Dumack, Kenneth ORCID: 0000-0001-8798-0483 (2020). What Drives the Diversity of the Most Abundant Terrestrial Cercozoan Family (Rhogostomidae, Cercozoa, Rhizaria)? Microorganisms, 8 (8). BASEL: MDPI. ISSN 2076-2607

Roshan, Samira Khanipour, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Karsten, Ulf and Glaser, Karin (2020). Stramenopiles and Cercozoa dominate the heterotrophic protist community of biological soil crusts irrespective of edaphic factors. Pedobiologia, 83. MUNICH: ELSEVIER GMBH. ISSN 1873-1511

Rossmann, Maike, Perez-Jaramillo, Juan E., Kavamura, Vanessa N., Chiaramonte, Josiane B., Dumack, Kenneth, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Mendes, Lucas W., Ferreira, Marcia M. C., Bonkowski, Michael, Raaijmakers, Jos M., Mauchline, Tim H. and Mendes, Rodrigo (2020). Multitrophic interactions in the rhizosphere microbiome of wheat: from bacteria and fungi to protists. FEMS Microbiol. Ecol., 96 (4). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Siemensma, Ferry and Dumack, Kenneth (2020). SSU rDNA Phylogeny Indicates the Scale-lacking Trivalvulariida ord. nov. as a Sister Group to the Euglyphida (Cercozoa, Rhizaria). Protist, 171 (1). MUNICH: ELSEVIER GMBH. ISSN 1618-0941

2019

Degrune, Florine, Dumack, Kenneth, Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Bonkowski, Michael, Sosa-Hernandez, Moises A., Schloter, Michael, Kautz, Timo, Fischer, Doreen and Rillig, Matthias C. ORCID: 0000-0003-3541-7853 (2019). Distinct communities of Cercozoa at different soil depths in a temperate agricultural field. FEMS Microbiol. Ecol., 95 (4). OXFORD: OXFORD UNIV PRESS. ISSN 1574-6941

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Kahlich, Christopher, Lahr, Daniel J. G. and Bonkowski, Michael (2019). Reinvestigation of Phryganella paradoxa (Arcellinida, Amoebozoa) Penard 1902. J. Eukaryot. Microbiol., 66 (2). S. 232 - 244. HOBOKEN: WILEY. ISSN 1550-7408

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Pundt, Julia and Bonkowski, Michael (2019). Food Choice Experiments Indicate Selective Fungivorous Predation in Fisculla terrestris (Thecofilosea, Cercozoa). J. Eukaryot. Microbiol., 66 (3). S. 525 - 528. HOBOKEN: WILEY. ISSN 1550-7408

Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Richter-Heitmann, Tim ORCID: 0000-0002-2791-7252, Degrune, Florine, Dumack, Kenneth, Regan, Kathleen M., Marhan, Sven, Boeddinghaus, Runa S., Rillig, Matthias C. ORCID: 0000-0003-3541-7853, Friedrich, Michael W. ORCID: 0000-0002-8055-3232, Kandeler, Ellen ORCID: 0000-0002-2854-0012 and Bonkowski, Michael (2019). Functional Traits and Spatio-Temporal Structure of a Major Group of Soil Protists (Rhizaria: Cercozoa) in a Temperate Grassland. Front. Microbiol., 10. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

Ntakou, Efthymia, Siemensma, Ferry, Bonkowski, Michael and Dumack, Kenneth ORCID: 0000-0001-8798-0483 (2019). The Dancing Star: Reinvestigation of Artodiscus saltans (Variosea, Amoebozoa) Penard 1890. Protist, 170 (4). S. 349 - 358. MUNICH: ELSEVIER GMBH. ISSN 1434-4610

2018

Dumack, Kenneth and Bonkowski, Michael (2018). Two new species and one new record for the genus Copris (Coleoptera: Scarabaeidae: Scarabaeinae) from Vietnam with a key to Vietnamese species. Eur. J. Entomol., 115. S. 167 - 192. CESKE BUDEJOVICE: CZECH ACAD SCI, INST ENTOMOLOGY. ISSN 1802-8829

Dumack, Kenneth, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Clauss, Steffen and Volcker, Eckhard (2018). Phylogeny and Redescription of the Testate Amoeba Diaphoropodon archeri (Chlamydophryidae, Thecofilosea, Cercozoa), De Saedeleer 1934, and Annotations on the Polyphyly of Testate Amoebae with Agglutinated Tests in the Cercozoa. J. Eukaryot. Microbiol., 65 (3). S. 308 - 315. HOBOKEN: WILEY. ISSN 1550-7408

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Siemensma, Ferry and Bonkowski, Michael (2018). Rediscovery of the Testate Amoeba Genus Penardeugenia (Thaumatomonadida, Imbricatea). Protist, 169 (1). S. 29 - 43. JENA: ELSEVIER GMBH, URBAN & FISCHER VERLAG. ISSN 1434-4610

Flues, Sebastian, Blokker, Malte, Dumack, Kenneth and Bonkowski, Michael (2018). Diversity of Cercomonad Species in the Phyllosphere and Rhizosphere of Different Plant Species with a Description ofNeocercomonas epiphylla (Cercozoa, Rhizaria) aLeaf-Associated Protist. J. Eukaryot. Microbiol., 65 (5). S. 587 - 600. HOBOKEN: WILEY. ISSN 1550-7408

Valencia, Enrique ORCID: 0000-0003-3359-0759, Gross, Nicolas ORCID: 0000-0001-9730-3240, Quero, Jose L., Carmona, Carlos P. ORCID: 0000-0001-6935-4913, Ochoa, Victoria, Gozalo, Beatriz, Delgado-Baquerizo, Manuel, Dumack, Kenneth, Hamonts, Kelly, Singh, Brajesh K., Bonkowski, Michael and Maestre, Fernando T. ORCID: 0000-0002-7434-4856 (2018). Cascading effects from plants to soil microorganisms explain how plant species richness and simulated climate change affect soil multifunctionality. Glob. Change Biol., 24 (12). S. 5642 - 5655. HOBOKEN: WILEY. ISSN 1365-2486

2017

Abolafia, Joaquin, Dumack, Kenneth, Bonkowski, Michael and Pena-Santiago, Reyes (2017). Two known species of Aporcelinus Andrassy, 2009 (Dorylaimida: Aporcelaimidae) from Vietnam, with the first molecular study of the genus. Nematology, 19 (7). S. 853 - 869. LEIDEN: BRILL ACADEMIC PUBLISHERS. ISSN 1388-5545

Dumack, Kenneth, Flues, Sebastian, Hermanns, Karoline and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2017). Rhogostomidae (Cercozoa) from soils, roots and plant leaves (Arabidopsis thaliana): Description of Rhogostoma epiphylla sp nov and R. cylindrica sp nov. Eur. J. Protistol., 60. S. 76 - 87. JENA: ELSEVIER GMBH, URBAN & FISCHER VERLAG. ISSN 1618-0429

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Mausbach, Paul, Hegmann, Mona and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2017). Polyphyly in the Thecate Amoeba Genus Lecythium (Chlamydophryidae, Tectofilosida, Cercozoa), Redescription of its Type Species L. hyalinum, Description of L-jennyae sp nov and the Establishment of Fisculla gen. nov and Fiscullidae fam. nov. Protist, 168 (3). S. 294 - 311. MUNICH: ELSEVIER GMBH. ISSN 1618-0941

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Mylnikov, Alexander P. and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2017). Evolutionary Relationship of the Scale-Bearing Kraken (incertae sedis, Monadofilosa, Cercozoa, Rhizaria): Combining Ultrastructure Data and a Two-Gene Phylogeny. Protist, 168 (3). S. 362 - 374. JENA: ELSEVIER GMBH, URBAN & FISCHER VERLAG. ISSN 1434-4610

Dumack, Kenneth ORCID: 0000-0001-8798-0483, Oeztoprak, Huesna, Rueger, Lioba and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2017). Shedding Light on the Polyphyletic Thecate Amoeba Genus Plagiophrys: Transition of Some of its Species to Rhizaspis (Tectofilosida, Thecofilosea, Cercozoa) and the Establishment of Sacciforma gen. nov and Rhogostomidae fam. nov (Cryomonadida, Thecofilosea, Cercozoa). Protist, 168 (1). S. 92 - 109. MUNICH: ELSEVIER GMBH. ISSN 1618-0941

Seppey, Christophe V. W., Singer, David ORCID: 0000-0002-4116-033X, Dumack, Kenneth ORCID: 0000-0001-8798-0483, Fournier, Bertrand ORCID: 0000-0002-7106-6109, Belbahri, Lassadd, Mitchell, Edward A. D. and Lara, Enrique ORCID: 0000-0001-8500-522X (2017). Distribution patterns of soil microbial eukaryotes suggests widespread algivory by phagotrophic protists as an alternative pathway for nutrient cycling. Soil Biol. Biochem., 112. S. 68 - 77. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 0038-0717

2016

Andriuzzi, Walter S., Geisen, Stefan ORCID: 0000-0003-0734-727X, Keith, Aidan M., Dumack, Kenneth, Bolger, Thomas, Bonkowski, Michael ORCID: 0000-0003-2656-1183, Brussaard, Lijbert ORCID: 0000-0003-3870-1411, Faber, Jack H., Chabbi, Abad, Rumpel, Cornelia ORCID: 0000-0003-2131-9451 and Schmidt, Olaf ORCID: 0000-0003-0098-7960 (2016). Organic matter composition and the protist and nematode communities around anecic earthworm burrows. Biol. Fertil. Soils, 52 (1). S. 91 - 101. NEW YORK: SPRINGER. ISSN 1432-0789

Dumack, Kenneth (2016). Novel Lineages in Cercozoa and Their Feeding Strategies. PhD thesis, Universität zu Köln.

Dumack, Kenneth, Baumann, Christina and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2016). A Bowl with Marbles: Revision of the Thecate Amoeba Genus Lecythium (Chlamydophryidae, Tectofilosida, Cercozoa, Rhizaria) Includinga Description of Four New Species and an Identification Key. Protist, 167 (5). S. 440 - 460. JENA: ELSEVIER GMBH, URBAN & FISCHER VERLAG. ISSN 1434-4610

Dumack, Kenneth, Koller, Robert ORCID: 0000-0001-7251-7242, Weber, Bettina ORCID: 0000-0002-5453-3967 and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2016). Estimated abundance and diversity of heterotrophic protists in South African biocrusts. S. Afr. J. Sci., 112 (7-8). S. 56 - 61. LYNWOOD RIDGE: ACAD SCIENCE SOUTH AFRICA A S S AF. ISSN 1996-7489

Dumack, Kenneth, Mueller, Marina E. H. and Bonkowski, Michael (2016). Description of Lecythium terrestris sp nov (Chlamydophryidae, Cercozoa), a Soil Dwelling Protist Feeding on Fungi and Algae. Protist, 167 (2). S. 93 - 106. MUNICH: ELSEVIER GMBH. ISSN 1618-0941

Dumack, Kenneth, Schuster, Julia, Bass, David and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2016). A Novel Lineage of 'Naked Filose Amoebae'; Kraken carinae gen. nov sp nov (Cercozoa) with a Remarkable Locomotion by Disassembly of its Cell Body. Protist, 167 (3). S. 268 - 279. MUNICH: ELSEVIER GMBH. ISSN 1434-4610

Geisen, Stefan ORCID: 0000-0003-0734-727X, Koller, Robert ORCID: 0000-0001-7251-7242, Huenninghaus, Maike, Dumack, Kenneth, Urich, Tim ORCID: 0000-0002-5718-1354 and Bonkowski, Michael ORCID: 0000-0003-2656-1183 (2016). The soil food web revisited: Diverse and widespread mycophagous soil protists. Soil Biol. Biochem., 94. S. 10 - 19. OXFORD: PERGAMON-ELSEVIER SCIENCE LTD. ISSN 0038-0717

Tice, Alexander K., Shadwick, Lora L., Fiore-Donno, Anna Maria ORCID: 0000-0001-6265-1907, Geisen, Stefan ORCID: 0000-0003-0734-727X, Kang, Seungho, Schuler, Gabriel A., Spiegel, Frederick W., Wilkinson, Katherine A., Bonkowski, Michael ORCID: 0000-0003-2656-1183, Dumack, Kenneth, Lahr, Daniel J. G., Voelcker, Eckhard, Clauss, Steffen, Zhang, Junling and Brown, Matthew W. (2016). Expansion of the molecular and morphological diversity of Acanthamoebidae (Centramoebida, Amoebozoa) and identification of a novel life cycle type within the group. Biol. Direct, 11. LONDON: BMC. ISSN 1745-6150