Universität zu Köln

Journal Article

Cappelletti, Valentina, Hauser, Thomas, Piazza, Ilaria ORCID: 0000-0001-5895-6134, Pepelnjak, Monika, Malinovska, Liliana ORCID: 0000-0002-8514-4569, Fuhrer, Tobias, Li, Yaozong ORCID: 0000-0002-5796-2644, Doerig, Christian, Boersema, Paul, Gillet, Ludovic, Grossbach, Jan, Dugourd, Aurelien, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Beyer, Andreas ORCID: 0000-0002-3891-2123, Zamboni, Nicola ORCID: 0000-0003-1271-1021, Caflisch, Amedeo, de Souza, Natalie and Picotti, Paola ORCID: 0000-0002-4109-3552 (2021). Dynamic 3D proteomes reveal protein functional alterations at high resolution in situ. Cell, 184 (2). S. 545 - 582. CAMBRIDGE: CELL PRESS. ISSN 1097-4172

Eduati, Federica ORCID: 0000-0002-7822-3867, Mangravite, Lara M., Wang, Tao, Tang, Hao, Bare, J. Christopher ORCID: 0000-0003-1006-1491, Huang, Ruili, Norman, Thea, Kellen, Mike, Menden, Michael P., Yang, Jichen, Zhan, Xiaowei, Zhong, Rui, Xiao, Guanghua, Xia, Menghang, Abdo, Nour, Kosyk, Oksana, Friend, Stephen, Dearry, Allen, Simeonov, Anton, Tice, Raymond R., Rusyn, Ivan ORCID: 0000-0001-9340-7384, Wright, Fred A., Stolovitzky, Gustavo, Xie, Yang, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Aittokallio, Tero ORCID: 0000-0002-0886-9769, Alaimo, Salvatore, Amadoz, Alicia ORCID: 0000-0003-3915-0404, Ammad-ud-din, Muhammad, Azencott, Chloe-Agathe ORCID: 0000-0003-1003-301X, Bacardit, Jaume ORCID: 0000-0002-2692-7205, Barron, Pelham, Bernard, Elsa ORCID: 0000-0002-2057-7187, Beyer, Andreas ORCID: 0000-0002-3891-2123, Bin, Shao, van Boemmel, Alena, Borgwardt, Karsten, Brys, April M., Caffrey, Brian, Chang, Jeffrey, Chang, Jungsoo, Chheda, Himanshu, Christodoulou, Eleni G., Clement-Ziza, Mathieu ORCID: 0000-0003-2763-249X, Cohen, Trevor, Cowherd, Marianne ORCID: 0000-0002-3165-4504, Demeyer, Sofie ORCID: 0000-0002-8193-5734, Dopazo, Joaquin, Elhard, Joel D., Falcao, Andre O. ORCID: 0000-0002-3588-8746, Ferro, Alfredo, Friedenberg, David A., Giugno, Rosalba ORCID: 0000-0001-9843-7638, Gong, Yunguo, Gorospe, Jenni W., Granville, Courtney A., Grimm, Dominik, Heinig, Matthias ORCID: 0000-0002-5612-1720, Hernansaiz, Rosa D., Hintsanen, Petteri, Hochreiter, Sepp ORCID: 0000-0001-7449-2528, Huang, Liang-Chin, Huska, Matthew, Jaiswal, Alok, Jiao, Yunlong, Kaski, Samuel ORCID: 0000-0003-1925-9154, Kaur, Ismeet, Khan, Suleiman Ali, Klambauer, Guenter, Krasnogor, Natalio, Kuhn, Michael, Kursa, Miron Bartosz, Kutum, Rintu, Lazzarini, Nicola, Lee, Inhan, Leung, Michael K. K., Lim, Weng Khong ORCID: 0000-0003-4391-1130, Liu, Charlie, Lopez, Felipe Llinares, Mammana, Alessandro, Mayr, Andreas, Michoel, Tom ORCID: 0000-0003-4749-4725, Mongiovi, Misael, Moore, Jonathan D., Mpindi, John-Patrick, Narasimhan, Ravi, Opiyo, Stephen O., Pandey, Gaurav, Peabody, Andrea L., Perner, Juliane, Poso, Antti ORCID: 0000-0003-4196-4204, Pulvirenti, Alfredo ORCID: 0000-0002-9764-0295, Rawlik, Konrad, Reinhardt, Susanne, Riffle, Carol G., Ruderfer, Douglas, Sander, Aaron J., Savage, Richard S., Scornet, Erwan, Sebastian-Leon, Patricia, Sharan, Roded, Simon-Gabriel, Carl Johann, Stoven, Veronique, Sun, Jingchun, Tang, Jing ORCID: 0000-0001-7480-7710, Teixeira, Ana L., Tenesa, Albert, Vert, Jean-Philippe ORCID: 0000-0001-9510-8441, Vingron, Martin, Walter, Thomas ORCID: 0000-0001-7419-7879, Wennerberg, Krister, Whalen, Sean, Wisniewska, Zofia, Wu, Yonghui, Xu, Hua, Zhang, Shihua, Zhao, Junfei and Zheng, W. Jim (2015). Prediction of human population responses to toxic compounds by a collaborative competition. Nat. Biotechnol., 33 (9). S. 933 - 944. NEW YORK: NATURE PUBLISHING GROUP. ISSN 1546-1696

Pawluczyk, Izabella Z. A., Didangelos, Athanasios, Barbour, Sean J., Er, Lee, Becker, Jan U., Martin, Roberto, Taylor, Scott, Bhachu, Jasraj S., Lyons, Edward G., Jenkins, Robert H., Fraser, Donald, Molyneux, Karen, Perales-Paton, Javier ORCID: 0000-0003-0780-6683, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976 and Barratt, Jonathan ORCID: 0000-0002-9063-7229 (2021). Differential expression of microRNA miR-150-5p in IgA nephropathy as a potential mediator and marker of disease progression. Kidney Int., 99 (5). S. 1127 - 1140. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1523-1755

Reusch, Bjorn, Bartram, Malte P., Dafinger, Claudia, Palacio-Escat, Nicolas ORCID: 0000-0002-7022-1437, Wenzel, Andrea, Fenton, Robert A., Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Schermer, Bernhard, Benzing, Thomas, Altmueller, Janine, Beck, Bodo B. and Rinschen, Markus M. (2022). MAGED2 controls vasopressin-induced aquaporin-2 expression in collecting duct cells. J. Proteomics, 252. AMSTERDAM: ELSEVIER. ISSN 1876-7737

Rinschen, Markus M., Palygin, Oleg ORCID: 0000-0002-3680-5527, Guijas, Carlos ORCID: 0000-0001-7993-3388, Palermo, Amelia ORCID: 0000-0001-5705-6521, Palacio-Escat, Nicolas ORCID: 0000-0002-7022-1437, Domingo-Almenara, Xavier ORCID: 0000-0002-0133-6863, Montenegro-Burke, Rafael, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Staruschenko, Alexander ORCID: 0000-0002-5190-8356 and Siuzdak, Gary ORCID: 0000-0002-4749-0014 (2019). Metabolic rewiring of the hypertensive kidney. Sci. Signal., 12 (611). WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE. ISSN 1937-9145

Rinschen, Markus M. and Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976 . The tissue proteome in the multi-omic landscape of kidney disease. Nat. Rev. Nephrol.. BERLIN: NATURE RESEARCH. ISSN 1759-507X

Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Rinschen, Markus M., Floege, Juergen and Kramann, Rafael (2019). Big science and big data in nephrology. Kidney Int., 95 (6). S. 1326 - 1338. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1523-1755

Sciacovelli, Marco, Dugourd, Aurelien, Jimenez, Lorea Valcarcel, Yang, Ming ORCID: 0000-0002-7735-7804, Nikitopoulou, Efterpi, Costa, Ana S. H., Tronci, Laura, Caraffini, Veronica, Rodrigues, Paulo, Schmidt, Christina ORCID: 0000-0002-3867-0881, Ryan, Dylan Gerard, Young, Timothy, Zecchini, Vincent R., Rossi, Sabrina H., Massie, Charlie, Lohoff, Caroline ORCID: 0000-0002-3084-8833, Masid, Maria, Hatzimanikatis, Vassily, Kuppe, Christoph, Von Kriegsheim, Alex, Kramann, Rafael, Gnanapragasam, Vincent, Warren, Anne Y., Stewart, Grant D., Erez, Ayelet, Vanharanta, Sakari, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976 and Frezza, Christian (2022). Dynamic partitioning of branched-chain amino acids-derived nitrogen supports renal cancer progression. Nat. Commun., 13 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723

Spaeth, Martin R., Bartram, Malte P., Palacio-Escat, Nicolas ORCID: 0000-0002-7022-1437, Hoyer, K. Johanna R., Debes, Cedric, Demir, Fatih ORCID: 0000-0002-5744-0205, Schroeter, Christina B., Mandel, Amrei M., Grundmann, Franziska, Ciarimboli, Giuliano, Beyer, Andreas ORCID: 0000-0002-3891-2123, Kizhakkedathu, Jayachandran N., Brodesser, Susanne, Goebel, Heike, Becker, Jan U., Benzing, Thomas, Schermer, Bernhard ORCID: 0000-0002-5194-9000, Hoehne, Martin, Burst, Volker, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Huesgen, Pitter F., Mueller, Roman-Ulrich and Rinschen, Markus M. (2019). The proteome microenvironment determines the protective effect of preconditioning in cisplatin-induced acute kidney injury. Kidney Int., 95 (2). S. 333 - 350. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1523-1755

Tognetti, Marco, Gabor, Attila, Yang, Mi, Cappelletti, Valentina, Windhager, Jonas ORCID: 0000-0002-2111-5291, Rueda, Oscar M., Charmpi, Konstantina, Esmaeilishirazifard, Elham, Bruna, Alejandra ORCID: 0000-0003-1214-9665, de Souza, Natalie, Caldas, Carlos, Beyer, Andreas, Picotti, Paola, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976 and Bodenmiller, Bernd (2021). Deciphering the signaling network of breast cancer improves drug sensitivity prediction. Cell Syst., 12 (5). S. 401 - 431. CAMBRIDGE: CELL PRESS. ISSN 2405-4720