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2022
Otto, Moritz ORCID: 0000-0001-5407-373X, Zheng, Yichen and Wiehe, Thomas
ORCID: 0000-0002-8932-2772
(2022).
Recombination, selection, and the evolution of tandem gene arrays.
Genetics, 221 (3).
BETHESDA:
GENETICS SOCIETY AMERICA.
ISSN 1943-2631
2020
Disanto, Filippo and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2020).
Measuring the external branches of a Kingman tree: A discrete approach.
Theor. Popul. Biol., 134.
S. 92 - 106.
SAN DIEGO:
ACADEMIC PRESS INC ELSEVIER SCIENCE.
ISSN 1096-0325
Heger, Peter ORCID: 0000-0003-2583-2981, Zheng, Wen, Rottmann, Anna, Panfilio, Kristen A. and Wiehe, Thomas
ORCID: 0000-0002-8932-2772
(2020).
The genetic factors of bilaterian evolution.
eLife, 9.
CAMBRIDGE:
ELIFE SCIENCES PUBLICATIONS LTD.
ISSN 2050-084X
Suurvaeli, Jaanus, Whiteley, Andrew R., Zheng, Yichen, Gharbi, Karim ORCID: 0000-0003-1092-4488, Leptin, Maria
ORCID: 0000-0001-7097-348X and Wiehe, Thomas
ORCID: 0000-0002-8932-2772
(2020).
The Laboratory Domestication of Zebrafish: From Diverse Populations to Inbred Substrains.
Mol. Biol. Evol., 37 (4).
S. 1056 - 1070.
OXFORD:
OXFORD UNIV PRESS.
ISSN 1537-1719
Wiehe, Thomas
(2020).
Counting, grafting and evolving binary trees.
Technical Report.
2019
Jabbari, Kamel, Chakraborty, Maharshi and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2019).
DNA sequence-dependent chromatin architecture and nuclear hubs formation.
Sci Rep, 9.
LONDON:
NATURE PUBLISHING GROUP.
ISSN 2045-2322
Jabbari, Kamel, Wirtz, Johannes, Rauscher, Martina and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2019).
A common genomic code for chromatin architecture and recombination landscape.
PLoS One, 14 (3).
SAN FRANCISCO:
PUBLIC LIBRARY SCIENCE.
ISSN 1932-6203
Schiffer, Philipp H., Danchin, Etienne G. J., Burnell, Ann M., Creevey, Christopher J., Wong, Simon, Dix, Ilona, O'Mahony, Georgina, Culleton, Bridget A., Rancurel, Corinne ORCID: 0000-0001-9355-5491, Stier, Gary, Martinez-Salazar, Elizabeth A., Marconi, Aleksandra, Trivedi, Urmi, Kroiher, Michael, Thorne, Michael A. S., Schierenberg, Einhard, Wiehe, Thomas
ORCID: 0000-0002-8932-2772 and Blaxter, Mark
(2019).
Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes.
iScience, 21.
S. 587 - 640.
CAMBRIDGE:
CELL PRESS.
ISSN 2589-0042
Wirtz, Johannes and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2019).
The Evolving Moran Genealogy.
Theor. Popul. Biol., 130.
S. 94 - 106.
SAN DIEGO:
ACADEMIC PRESS INC ELSEVIER SCIENCE.
ISSN 1096-0325
Zheng, Yichen and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2019).
Adaptation in structured populations and fuzzy boundaries between hard and soft sweeps.
PLoS Comput. Biol., 15 (11).
SAN FRANCISCO:
PUBLIC LIBRARY SCIENCE.
ISSN 1553-7358
2018
Ferretti, Luca ORCID: 0000-0001-7578-7301, Klassmann, Alexander
ORCID: 0000-0002-0175-1397, Raineri, Emanuele, Ramos-Onsins, Sebastian E., Wiehe, Thomas
ORCID: 0000-0002-8932-2772 and Achaz, Guillaume
(2018).
The neutral frequency spectrum of linked sites.
Theor. Popul. Biol., 123.
S. 70 - 80.
SAN DIEGO:
ACADEMIC PRESS INC ELSEVIER SCIENCE.
ISSN 1096-0325
Jabbari, Kamel, Heger, Peter ORCID: 0000-0003-2583-2981, Sharma, Ranu and Wiehe, Thomas
ORCID: 0000-0002-8932-2772
(2018).
The Diverging Routes of BORIS and CTCF: An Interactomic and Phylogenomic Analysis.
Life-Basel, 8 (1).
BASEL:
MDPI.
ISSN 2075-1729
Wirtz, Johannes, Rauscher, Martina and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2018).
Topological linkage disequilibrium calculated from coalescent genealogies.
Theor. Popul. Biol., 124.
S. 41 - 51.
SAN DIEGO:
ACADEMIC PRESS INC ELSEVIER SCIENCE.
ISSN 1096-0325
Yang, Zongfeng, Li, Junrui, Wiehe, Thomas ORCID: 0000-0002-8932-2772 and Li, Haipeng
(2018).
Detecting Recent Positive Selection with a Single Locus Test Bipartitioning the Coalescent Tree.
Genetics, 208 (2).
S. 791 - 806.
BETHESDA:
GENETICS SOCIETY AMERICA.
ISSN 1943-2631
2017
Ferretti, Luca ORCID: 0000-0001-7578-7301, Ledda, Alice, Wiehe, Thomas
ORCID: 0000-0002-8932-2772, Achaz, Guillaume and Ramos-Onsins, Sebastian E.
(2017).
Decomposing the Site Frequency Spectrum: The Impact of Tree Topology on Neutrality Tests.
Genetics, 207 (1).
S. 229 - 241.
BETHESDA:
GENETICS SOCIETY AMERICA.
ISSN 1943-2631
2016
Howe, Kerstin ORCID: 0000-0003-2237-513X, Schiffer, Philipp H., Zielinski, Julia, Wiehe, Thomas
ORCID: 0000-0002-8932-2772, Laird, Gavin K., Marioni, John C., Soylemez, Onuralp, Kondrashov, Fyodor and Leptin, Maria
ORCID: 0000-0001-7097-348X
(2016).
Structure and evolutionary history of a large family of NLR proteins in the zebrafish.
Open Biol, 6 (4).
LONDON:
ROYAL SOC.
ISSN 2046-2441
Pauli, Thomas, Vedder, Lucia ORCID: 0000-0002-8924-9800, Dowling, Daniel, Petersen, Malte
ORCID: 0000-0001-7601-9873, Meusemann, Karen, Donath, Alexander
ORCID: 0000-0001-5618-0547, Peters, Ralph S., Podsiadlowski, Lars
ORCID: 0000-0001-7786-8930, Mayer, Christoph
ORCID: 0000-0001-5104-6621, Liu, Shanlin, Zhou, Xin, Heger, Peter
ORCID: 0000-0003-2583-2981, Wiehe, Thomas
ORCID: 0000-0002-8932-2772, Hering, Lars
ORCID: 0000-0003-4469-991X, Mayer, Georg
ORCID: 0000-0003-0737-2440, Misof, Bernhard and Niehuis, Oliver
(2016).
Transcriptomic data from panarthropods shed new light on the evolution of insulator binding proteins in insects.
BMC Genomics, 17.
LONDON:
BMC.
ISSN 1471-2164
2014
Disanto, Filippo and Wiehe, Thomas ORCID: 0000-0002-8932-2772
(2014).
On the sub-permutations of pattern avoiding permutations.
Discret. Math., 337.
S. 127 - 142.
AMSTERDAM:
ELSEVIER.
ISSN 1872-681X
Heger, Peter ORCID: 0000-0003-2583-2981 and Wiehe, Thomas
ORCID: 0000-0002-8932-2772
(2014).
New tools in the box: An evolutionary synopsis chromatin insulators.
Trends Genet., 30 (5).
S. 161 - 172.
LONDON:
ELSEVIER SCIENCE LONDON.
ISSN 1362-4555
2013
Disanto, Filippo, Schlizio, Anna and Wiehe, Thomas (2013). Yule-generated trees constrained by node imbalance. Math. Biosci., 246 (1). S. 139 - 148. NEW YORK: ELSEVIER SCIENCE INC. ISSN 1879-3134
Heger, Peter ORCID: 0000-0003-2583-2981, George, Rebecca and Wiehe, Thomas
(2013).
SUCCESSIVE GAIN OF INSULATOR PROTEINS IN ARTHROPOD EVOLUTION.
Evolution, 67 (10).
S. 2945 - 2957.
HOBOKEN:
WILEY.
ISSN 1558-5646
2012
Heger, Peter ORCID: 0000-0003-2583-2981, Marin, Birger, Bartkuhn, Marek
ORCID: 0000-0001-6872-9082, Schierenberg, Einhard and Wiehe, Thomas
(2012).
The chromatin insulator CTCF and the emergence of metazoan diversity.
Proc. Natl. Acad. Sci. U. S. A., 109 (43).
S. 17507 - 17513.
WASHINGTON:
NATL ACAD SCIENCES.
ISSN 0027-8424