Neumann-Fraune, Maria, Beggel, Bastian, Kaiser, Rolf and Obermeier, Martin (2014). Hepatitis B Virus Drug Resistance Tools: One Sequence, Two Predictions. Intervirology, 57 (3-4). S. 232 - 237. BASEL: KARGER. ISSN 1423-0100

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Abstract

Drug resistance testing, genotype analysis, and the determination of immune and vaccine escape variants support personalized antiviral treatment for hepatitis B patients. As phenotypic drug resistance testing for hepatitis B virus (HBV) is especially labor-intensive, due to the lack of simple cell culture systems, genotypic methods play a very pronounced role. The genetic structure of HBV allows the simultaneous analysis of two different genes by examination of a single region in the genome of HBV. Nevertheless, the overlapping open reading frames of the hepatitis B surface antigen (HBsAg) and the reverse transcriptase (RT) have to be interpreted separately. In diagnostic procedures, standard Sanger type sequencing (mostly performed as a dye-dideoxynucleotide terminator system) is still the most commonly used method. This allows using established techniques for interpreting those types of genetic information. Besides reviewing the foundation of drug resistance interpretation for HBV, different interpretation systems, either commercially available (TRUGENE, Abbott, ViroScore) or free to use (geno2pheno[HBV], HIV-GRADE HBV tool), are compared in this article. (C) 2014 S. Karger AG, Basel

Item Type: Journal Article
Creators:
CreatorsEmailORCIDORCID Put Code
Neumann-Fraune, MariaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Beggel, BastianUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kaiser, RolfUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Obermeier, MartinUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
URN: urn:nbn:de:hbz:38-449960
DOI: 10.1159/000361076
Journal or Publication Title: Intervirology
Volume: 57
Number: 3-4
Page Range: S. 232 - 237
Date: 2014
Publisher: KARGER
Place of Publication: BASEL
ISSN: 1423-0100
Language: English
Faculty: Unspecified
Divisions: Unspecified
Subjects: no entry
Uncontrolled Keywords:
KeywordsLanguage
THERAPY; POLYMERASE; INFECTION; GENOTYPE; ADEFOVIRMultiple languages
VirologyMultiple languages
URI: http://kups.ub.uni-koeln.de/id/eprint/44996

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