Siems, Katharina, Runzheimer, Katharina, Rehm, Anna, Schwengers, Oliver ORCID: 0000-0003-4216-2721, von Heilborn, David Heidler, Kaser, Liv, Arndt, Franca ORCID: 0000-0003-0977-3969, Neidhoefer, Claudio, Mengel, Jan Philipp, Parcina, Marijo, Lipski, Andre, Hain, Torsten and Moeller, Ralf (2022). Phenotypic and genomic assessment of the potential threat of human spaceflight-relevant Staphylococcus capitis isolates under stress conditions. Front. Microbiol., 13. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

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Abstract

Previous studies have reported that spaceflight specific conditions such as microgravity lead to changes in bacterial physiology and resistance behavior including increased expression of virulence factors, enhanced biofilm formation and decreased susceptibility to antibiotics. To assess if spaceflight induced physiological changes can manifest in human-associated bacteria, we compared three spaceflight relevant Staphylococcus capitis isolates (DSM 111179, ISS; DSM 31028, clean room; DSM 113836; artificial gravity bedrest study) with the type strain (DSM 20326(T)). We tested the three strains regarding growth, colony morphology, metabolism, fatty acid and polar lipid pattern, biofilm formation, susceptibility to antibiotics and survival in different stress conditions such as treatment with hydrogen peroxide, exposure to desiccation, and irradiation with X-rays and UV-C. Moreover, we sequenced, assembled, and analyzed the genomes of all four strains. Potential genetic determinants for phenotypic differences were investigated by comparative genomics. We found that all four strains show similar metabolic patterns and the same susceptibility to antibiotics. All four strains were considered resistant to fosfomycin. Physiological differences were mainly observed compared to the type strain and minor differences among the other three strains. The ISS isolate and the bedrest study isolate exhibit a strong delayed yellow pigmentation, which is absent in the other two strains. Pigments were extracted and analyzed by UV/Vis spectroscopy showing characteristic carotenoid spectra. The ISS isolate showed the highest growth rate as well as weighted average melting temperature (WAMT) of fatty acids (41.8 degrees C) of all strains. The clean room isolate showed strongest biofilm formation and a high tolerance to desiccation. In general, all strains survived desiccation better in absence of oxygen. There were no differences among the strains regarding radiation tolerance. Phenotypic and genomic differences among the strains observed in this study are not inevitably indicating an increased virulence of the spaceflight isolate. However, the increased growth rate, higher WAMT and colony pigmentation of the spaceflight isolate are relevant phenotypes that require further research within the human spaceflight context. We conclude that combining genetic analysis with classical microbiological methods allows the detailed assessment of the potential threat of bacteria in highly regulated and extreme environments such as spaceflight environments.

Item Type: Journal Article
Creators:
CreatorsEmailORCIDORCID Put Code
Siems, KatharinaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Runzheimer, KatharinaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Rehm, AnnaUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Schwengers, OliverUNSPECIFIEDorcid.org/0000-0003-4216-2721UNSPECIFIED
von Heilborn, David HeidlerUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Kaser, LivUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Arndt, FrancaUNSPECIFIEDorcid.org/0000-0003-0977-3969UNSPECIFIED
Neidhoefer, ClaudioUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Mengel, Jan PhilippUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Parcina, MarijoUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Lipski, AndreUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Hain, TorstenUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
Moeller, RalfUNSPECIFIEDUNSPECIFIEDUNSPECIFIED
URN: urn:nbn:de:hbz:38-683663
DOI: 10.3389/fmicb.2022.1007143
Journal or Publication Title: Front. Microbiol.
Volume: 13
Date: 2022
Publisher: FRONTIERS MEDIA SA
Place of Publication: LAUSANNE
ISSN: 1664-302X
Language: English
Faculty: Unspecified
Divisions: Unspecified
Subjects: no entry
Uncontrolled Keywords:
KeywordsLanguage
INTERNATIONAL-SPACE-STATION; ANTIBIOTIC-RESISTANCE; HETEROTROPHIC BACTERIA; FATTY-ACIDS; HUMAN SKIN; BIOFILM; MICROGRAVITY; VIRULENCE; PIGMENTATION; DESICCATIONMultiple languages
MicrobiologyMultiple languages
URI: http://kups.ub.uni-koeln.de/id/eprint/68366

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