Universität zu Köln

Journal Article

Fatima, Azra, Irmak, Dilber, Noormohammadi, Alireza, Rinschen, Markus M., Das, Aniruddha ORCID: 0000-0002-7704-3573, Leidecker, Orsolya, Schindler, Christina, Sanchez-Gaya, Victor, Wagle, Prerana, Pokrzywa, Wojciech ORCID: 0000-0002-5110-4462, Hoppe, Thorsten ORCID: 0000-0002-4734-9352, Rada-Iglesias, Alvaro and Vilchez, David (2020). The ubiquitin-conjugating enzyme UBE2K determines neurogenic potential through histone H3 in human embryonic stem cells. Commun. Biol., 3 (1). NEW YORK: NATURE PUBLISHING GROUP. ISSN 2399-3642

Goncalves, Ines do Carmo G., Brecht, Johanna, Thelen, Maximilian P., Rehorst, Wiebke A., Peters, Miriam, Lee, Hyun Ju, Motameny, Susanne, Torres-Benito, Laura, Ebrahimi-Fakhari, Darius ORCID: 0000-0002-0026-4714, Kononenko, Natalia L., Altmueller, Janine, Vilchez, David ORCID: 0000-0002-0801-0743, Sahin, Mustafa, Wirth, Brunhilde ORCID: 0000-0003-4051-5191 and Kye, Min Jeong ORCID: 0000-0002-1323-7256 (2018). Neuronal activity regulates DROSHA via autophagy in spinal muscular atrophy. Sci Rep, 8. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Goncalves, Ines do Carmo G., Brecht, Johanna, Thelen, Maximilian P., Rehorst, Wiebke A., Peters, Miriam, Lee, Hyun Ju, Motameny, Susanne, Torres-Benito, Laura, Ebrahimi-Fakhari, Darius ORCID: 0000-0002-0026-4714, Kononenko, Natalia L., Altmueller, Janine, Vilchez, David, Sahin, Mustafa, Wirth, Brunhilde and Kye, Min Jeong (2018). Neuronal activity regulates DROSHA via autophagy in spinal muscular atrophy (vol 8, 7907, 2018). Sci Rep, 8. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Irmak, Dilber, Fatima, Azra, Gutierrez-Garcia, Ricardo, Rinschen, Markus M., Wagle, Prerana, Altmueller, Janine, Arrigoni, Laura, Hummel, Barbara ORCID: 0000-0001-6563-3675, Klein, Corinna, Frese, Christian K., Sawarkar, Ritwick, Rada-Iglesias, Alvaro ORCID: 0000-0001-7137-1341 and Vilchez, David ORCID: 0000-0002-0801-0743 (2018). Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations. Hum. Mol. Genet., 27 (23). S. 4117 - 4135. OXFORD: OXFORD UNIV PRESS. ISSN 1460-2083

Koyuncu, Seda, Fatima, Azra, Gutierrez-Garcia, Ricardo and Vilchez, David ORCID: 0000-0002-0801-0743 (2017). Proteostasis of Huntingtin in Health and Disease. Int. J. Mol. Sci., 18 (7). BASEL: MDPI. ISSN 1422-0067

Koyuncu, Seda, Saez, Isabel, Lee, Hyun Ju, Gutierrez-Garcia, Ricardo, Pokrzywa, Wojciech ORCID: 0000-0002-5110-4462, Fatima, Azra, Hoppe, Thorsten ORCID: 0000-0002-4734-9352 and Vilchez, David ORCID: 0000-0002-0801-0743 (2018). The ubiquitin ligase UBR5 suppresses proteostasis collapse in pluripotent stem cells from Huntington's disease patients. Nat. Commun., 9. BERLIN: NATURE RESEARCH. ISSN 2041-1723

Kumsta, Caroline, Chang, Jessica T., Lee, Reina, Tan, Ee Phie, Yang, Yongzhi, Loureiro, Rute, Choy, Elizabeth H., Lim, Shaun H. Y., Saez, Isabel, Springhorn, Alexander, Hoppe, Thorsten, Vilchez, David and Hansen, Malene (2019). The autophagy receptor p62/SQST-1 promotes proteostasis and longevity in C. elegans by inducing autophagy. Nat. Commun., 10. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Lee, Hyun Ju, Bartsch, Deniz, Xiao, Cally ORCID: 0000-0001-7172-3175, Guerrero, Santiago ORCID: 0000-0003-3473-7214, Ahuja, Gaurav ORCID: 0000-0002-2837-9361, Schindler, Christina, Moresco, James J., Yates, John R., III, Gebauer, Fatima ORCID: 0000-0001-7563-0013, Bazzi, Hisham ORCID: 0000-0001-8388-4005, Dieterich, Christoph, Kurian, Leo ORCID: 0000-0001-7466-5169 and Vilchez, David ORCID: 0000-0002-0801-0743 (2017). A post-transcriptional program coordinated by CSDE1 prevents intrinsic neural differentiation of human embryonic stem cells. Nat. Commun., 8. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Lee, Hyun Ju, Gutierrez-Garcia, Ricardo and Vilchez, David ORCID: 0000-0002-0801-0743 (2017). Embryonic stem cells: a novel paradigm to study proteostasis? FEBS J., 284 (3). S. 391 - 399. HOBOKEN: WILEY-BLACKWELL. ISSN 1742-4658

Lee, Hyun Ju, Noormohammadi, Alireza, Koyuncu, Seda, Calculli, Giuseppe, Simic, Milos S., Herholz, Marija, Trifunovic, Aleksandra ORCID: 0000-0002-5472-3517 and Vilchez, David ORCID: 0000-0002-0801-0743 (2019). Prostaglandin signals from adult germline stem cells delay somatic ageing of Caenorhabditis elegans. Nat. Metab., 1 (8). S. 790 - 811. LONDON: NATURE PUBLISHING GROUP. ISSN 2522-5812

Llamas, Ernesto, Alirzayeva, Hafiza, Loureiro, Rute and Vilchez, David (2020). The intrinsic proteostasis network of stem cells. Curr. Opin. Cell Biol., 67. S. 46 - 56. LONDON: CURRENT BIOLOGY LTD. ISSN 1879-0410

Noormohammadi, Alireza, Calculli, Giuseppe, Gutierrez-Garcia, Ricardo, Khodakarami, Amirabbas, Koyuncu, Seda and Vilchez, David ORCID: 0000-0002-0801-0743 (2018). Mechanisms of protein homeostasis (proteostasis) maintain stem cell identity in mammalian pluripotent stem cells. Cell. Mol. Life Sci., 75 (2). S. 275 - 291. BASEL: SPRINGER BASEL AG. ISSN 1420-9071

Noormohammadi, Alireza, Khodakarami, Amirabbas, Gutierrez-Garcia, Ricardo, Lee, Hyun Ju, Koyuncu, Seda, Nig, Tim Ko, Schindler, Christina, Saez, Isabel, Fatima, Azra, Dieterich, Christoph and Vilchez, David ORCID: 0000-0002-0801-0743 (2016). Somatic increase of CCT8 mimics proteostasis of human pluripotent stem cells and extends C-elegans lifespan. Nat. Commun., 7. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Rinschen, Markus M., Bharill, Puneet, Wu, Xiongwu, Kohli, Priyanka ORCID: 0000-0002-0651-4008, Reinert, Matthaeus J., Kretz, Oliver, Saez, Isabel, Schermer, Bernhard ORCID: 0000-0002-5194-9000, Hoehne, Martin, Bartram, Malte P., Aravamudhan, Sriram, Brooks, Bernard R., Vilchez, David ORCID: 0000-0002-0801-0743, Huber, Tobias B. ORCID: 0000-0001-7175-5062, Mueller, Roman-Ulrich, Krueger, Marcus and Benzing, Thomas (2016). The ubiquitin ligase Ubr4 controls stability of podocin/MEC-2 supercomplexes. Hum. Mol. Genet., 25 (7). S. 1328 - 1345. OXFORD: OXFORD UNIV PRESS. ISSN 1460-2083

Saez, Isabel, Gerbracht, Jennifer, V, Koyuncu, Seda, Lee, Hyun Ju, Horn, Moritz, Kroef, Virginia, Denzel, Martin S., Dieterich, Christoph, Gehring, Niels H. and Vilchez, David ORCID: 0000-0002-0801-0743 (2020). The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells. FEBS Lett., 594 (1). S. 175 - 189. HOBOKEN: WILEY. ISSN 1873-3468

Saez, Isabel, Koyuncu, Seda, Gutierrez-Garcia, Ricardo, Dieterich, Christoph and Vilchez, David ORCID: 0000-0002-0801-0743 (2018). Insights into the ubiquitin-proteasome system of human embryonic stem cells. Sci Rep, 8. LONDON: NATURE PUBLISHING GROUP. ISSN 2045-2322

Thiruvalluvan, Arun, de Mattos, Eduardo P., Brunsting, Jeanette F., Bakels, Rob, Serlidaki, Despina, Barazzuol, Lara, Conforti, Paola, Fatima, Azra, Koyuncu, Seda, Cattaneo, Elena, Vilchez, David, Bergink, Steven, Boddeke, Erik H. W. G., Copray, Sjef and Kampinga, Harm H. (2020). DNAJB6, a Key Factor in Neuronal Sensitivity to Amyloidogenesis. Mol. Cell, 78 (2). S. 346 - 368. CAMBRIDGE: CELL PRESS. ISSN 1097-4164