Universität zu Köln

Journal Article

Du Bois, Ilona, Marsico, Annalisa, Bertrams, Wilhelm ORCID: 0000-0002-0180-2529, Schweiger, Michal R., Caffrey, Brian E., Sittka-Stark, Alexandra, Eberhardt, Martin, Vera, Julio ORCID: 0000-0002-3076-5122, Vingron, Martin and Schmeck, Bernd T. (2016). Genome-wide Chromatin Profiling of Legionella pneumophila-Infected Human Macrophages Reveals Activation of the Probacterial Host Factor TNFAIP2. J. Infect. Dis., 214 (3). S. 454 - 464. CARY: OXFORD UNIV PRESS INC. ISSN 1537-6613

Eduati, Federica ORCID: 0000-0002-7822-3867, Mangravite, Lara M., Wang, Tao, Tang, Hao, Bare, J. Christopher ORCID: 0000-0003-1006-1491, Huang, Ruili, Norman, Thea, Kellen, Mike, Menden, Michael P., Yang, Jichen, Zhan, Xiaowei, Zhong, Rui, Xiao, Guanghua, Xia, Menghang, Abdo, Nour, Kosyk, Oksana, Friend, Stephen, Dearry, Allen, Simeonov, Anton, Tice, Raymond R., Rusyn, Ivan ORCID: 0000-0001-9340-7384, Wright, Fred A., Stolovitzky, Gustavo, Xie, Yang, Saez-Rodriguez, Julio ORCID: 0000-0002-8552-8976, Aittokallio, Tero ORCID: 0000-0002-0886-9769, Alaimo, Salvatore, Amadoz, Alicia ORCID: 0000-0003-3915-0404, Ammad-ud-din, Muhammad, Azencott, Chloe-Agathe ORCID: 0000-0003-1003-301X, Bacardit, Jaume ORCID: 0000-0002-2692-7205, Barron, Pelham, Bernard, Elsa ORCID: 0000-0002-2057-7187, Beyer, Andreas ORCID: 0000-0002-3891-2123, Bin, Shao, van Boemmel, Alena, Borgwardt, Karsten, Brys, April M., Caffrey, Brian, Chang, Jeffrey, Chang, Jungsoo, Chheda, Himanshu, Christodoulou, Eleni G., Clement-Ziza, Mathieu ORCID: 0000-0003-2763-249X, Cohen, Trevor, Cowherd, Marianne ORCID: 0000-0002-3165-4504, Demeyer, Sofie ORCID: 0000-0002-8193-5734, Dopazo, Joaquin, Elhard, Joel D., Falcao, Andre O. ORCID: 0000-0002-3588-8746, Ferro, Alfredo, Friedenberg, David A., Giugno, Rosalba ORCID: 0000-0001-9843-7638, Gong, Yunguo, Gorospe, Jenni W., Granville, Courtney A., Grimm, Dominik, Heinig, Matthias ORCID: 0000-0002-5612-1720, Hernansaiz, Rosa D., Hintsanen, Petteri, Hochreiter, Sepp ORCID: 0000-0001-7449-2528, Huang, Liang-Chin, Huska, Matthew, Jaiswal, Alok, Jiao, Yunlong, Kaski, Samuel ORCID: 0000-0003-1925-9154, Kaur, Ismeet, Khan, Suleiman Ali, Klambauer, Guenter, Krasnogor, Natalio, Kuhn, Michael, Kursa, Miron Bartosz, Kutum, Rintu, Lazzarini, Nicola, Lee, Inhan, Leung, Michael K. K., Lim, Weng Khong ORCID: 0000-0003-4391-1130, Liu, Charlie, Lopez, Felipe Llinares, Mammana, Alessandro, Mayr, Andreas, Michoel, Tom ORCID: 0000-0003-4749-4725, Mongiovi, Misael, Moore, Jonathan D., Mpindi, John-Patrick, Narasimhan, Ravi, Opiyo, Stephen O., Pandey, Gaurav, Peabody, Andrea L., Perner, Juliane, Poso, Antti ORCID: 0000-0003-4196-4204, Pulvirenti, Alfredo ORCID: 0000-0002-9764-0295, Rawlik, Konrad, Reinhardt, Susanne, Riffle, Carol G., Ruderfer, Douglas, Sander, Aaron J., Savage, Richard S., Scornet, Erwan, Sebastian-Leon, Patricia, Sharan, Roded, Simon-Gabriel, Carl Johann, Stoven, Veronique, Sun, Jingchun, Tang, Jing ORCID: 0000-0001-7480-7710, Teixeira, Ana L., Tenesa, Albert, Vert, Jean-Philippe ORCID: 0000-0001-9510-8441, Vingron, Martin, Walter, Thomas ORCID: 0000-0001-7419-7879, Wennerberg, Krister, Whalen, Sean, Wisniewska, Zofia, Wu, Yonghui, Xu, Hua, Zhang, Shihua, Zhao, Junfei and Zheng, W. Jim (2015). Prediction of human population responses to toxic compounds by a collaborative competition. Nat. Biotechnol., 33 (9). S. 933 - 944. NEW YORK: NATURE PUBLISHING GROUP. ISSN 1546-1696

Fernandez-Cuesta, Lynnette ORCID: 0000-0002-0724-6703, Peifer, Martin ORCID: 0000-0002-5243-5503, Lu, Xin, Sun, Ruping, Ozretic, Luka, Seidel, Danila ORCID: 0000-0003-4388-3117, Zander, Thomas, Leenders, Frauke, George, Julie, Mueller, Christian, Dahmen, Ilona, Pinther, Berit, Bosco, Graziella, Konrad, Kathryn, Altmueller, Janine, Nuernberg, Peter, Achter, Viktor, Lang, Ulrich ORCID: 0000-0001-7166-0805, Schneider, Peter M. ORCID: 0000-0003-0744-2349, Bogus, Magdalena, Soltermann, Alex, Brustugun, Odd Terje, Helland, Aslaug ORCID: 0000-0002-5520-0275, Solberg, Steinar, Lund-Iversen, Marius, Ansen, Sascha, Stoelben, Erich, Wright, Gavin M., Russell, Prudence, Wainer, Zoe, Solomon, Benjamin, Field, John K. ORCID: 0000-0003-3951-6365, Hyde, Russell, Davies, Michael P. A., Heukamp, Lukas C., Petersen, Iver, Perner, Sven, Lovly, Christine M., Cappuzzo, Federico, Travis, William D., Wolf, Juergen, Vingron, Martin, Brambilla, Elisabeth, Haas, Stefan A., Buettner, Reinhard and Thomas, Roman K. (2014). Frequent mutations in chromatin-remodelling genes in pulmonary carcinoids. Nat. Commun., 5. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Fernandez-Cuesta, Lynnette ORCID: 0000-0002-0724-6703, Plenker, Dennis, Osada, Hirotaka, Sun, Ruping, Menon, Roopika, Leenders, Frauke, Ortiz-Cuaran, Sandra, Peifer, Martin ORCID: 0000-0002-5243-5503, Bos, Marc, Dassler, Juliane, Malchers, Florian, Schottle, Jakob, Vogel, Wenzel, Dahmen, Ilona, Koker, Mirjam, Ullrich, Roland T., Wright, Gavin M., Russell, Prudence A., Wainer, Zoe, Solomon, Benjamin, Brambilla, Elisabeth, Nagy-Mignotte, Helene, Moro-Sibilot, Denis, Brambilla, Christian G., Lantuejoul, Sylvie, Altmuller, Janine, Becker, Christian, Nurnberg, Peter, Heuckmann, Johannes M., Stoelben, Erich, Petersen, Iver, Clement, Joachim H. ORCID: 0000-0002-6601-2456, Saenger, Joerg, Muscarella, Lucia A., la Torre, Annamaria ORCID: 0000-0003-4199-1077, Fazio, Vito M., Lahortiga, Idoya, Perera, Timothy, Ogata, Souichi, Parade, Marc, Brehmer, Dirk, Vingron, Martin, Heukamp, Lukas C., Buettner, Reinhard, Zander, Thomas, Wolf, Jurgen, Perner, Sven, Ansen, Sascha, Haas, Stefan A., Yatabe, Yasushi ORCID: 0000-0003-1788-559X and Thomas, Roman K. (2014). CD74-NRG1 Fusions in Lung Adenocarcinoma. Cancer Discov., 4 (4). S. 415 - 423. PHILADELPHIA: AMER ASSOC CANCER RESEARCH. ISSN 2159-8290

Fernandez-Cuesta, Lynnette ORCID: 0000-0002-0724-6703, Sun, Ruping, Menon, Roopika, George, Julie, Lorenz, Susanne, Meza-Zepeda, Leonardo A., Peifer, Martin ORCID: 0000-0002-5243-5503, Plenker, Dennis, Heuckmann, Johannes M., Leenders, Frauke, Zander, Thomas, Dahmen, Ilona, Koker, Mirjam, Schoettle, Jakob, Ullrich, Roland T., Altmueller, Janine, Becker, Christian, Nuernberg, Peter, Seidel, Henrik ORCID: 0000-0001-7804-5143, Boehm, Diana, Goeke, Friederike, Ansen, Sascha, Russell, Prudence A., Wright, Gavin M., Wainer, Zoe, Solomon, Benjamin, Petersen, Iver, Clement, Joachim H. ORCID: 0000-0002-6601-2456, Saenger, Joerg, Brustugun, Odd-Terje, Helland, Aslaug ORCID: 0000-0002-5520-0275, Solberg, Steinar, Lund-Iversen, Marius, Buettner, Reinhard, Wolf, Juergen, Brambilla, Elisabeth, Vingron, Martin, Perner, Sven, Haas, Stefan A. and Thomas, Roman K. (2015). Identification of novel fusion genes in lung cancer using breakpoint assembly of transcriptome sequencing data. Genome Biol., 16. LONDON: BIOMED CENTRAL LTD. ISSN 1474-760X

George, Julie, Lim, Jing Shan, Jang, Se Jin, Cun, Yupeng ORCID: 0000-0002-4241-8099, Ozretic, Luka, Kong, Gu, Leenders, Frauke, Lu, Xin, Fernandez-Cuesta, Lynnette ORCID: 0000-0002-0724-6703, Bosco, Graziella, Mueller, Christian, Dahmen, Ilona, Jahchan, Nadine S., Park, Kwon-Sik, Yang, Dian, Karnezis, Anthony N., Vaka, Dedeepya ORCID: 0000-0001-7951-5514, Torres, Angela, Wang, Maia Segura, Korbel, Jan O., Menon, Roopika, Chun, Sung-Min ORCID: 0000-0002-3357-1382, Kim, Deokhoon, Wilkerson, Matt, Hayes, Neil, Engelmann, David, Puetzer, Brigitte, Bos, Marc, Michels, Sebastian, Vlasic, Ignacija, Seidel, Danila ORCID: 0000-0003-4388-3117, Pinther, Berit, Schaub, Philipp, Becker, Christian, Altmueller, Janine, Yokota, Jun, Kohno, Takashi, Iwakawa, Reika, Tsuta, Koji, Noguchi, Masayuki, Muley, Thomas, Hoffmann, Hans, Schnabel, Philipp A., Petersen, Iver, Chen, Yuan, Soltermann, Alex, Tischler, Verena ORCID: 0000-0002-6673-8329, Choi, Chang-min, Kim, Yong-Hee, Massion, Pierre P., Zou, Yong, Jovanovic, Dragana, Kontic, Milica, Wright, Gavin M., Russell, Prudence A., Solomon, Benjamin, Koch, Ina, Lindner, Michael, Muscarella, Lucia A., la Torre, Annamaria ORCID: 0000-0003-4199-1077, Field, John K. ORCID: 0000-0003-3951-6365, Jakopovic, Marko, Knezevic, Jelena, Castanos-Velez, Esmeralda ORCID: 0000-0002-2670-1118, Roz, Luca ORCID: 0000-0001-5817-7149, Pastorino, Ugo ORCID: 0000-0001-9974-7902, Brustugun, Odd-Terje, Lund-Iversen, Marius, Thunnissen, Erik, Koehler, Jens, Schuler, Martin, Botling, Johan, Sandelin, Martin ORCID: 0000-0002-0370-8819, Sanchez-Cespedes, Montserrat, Salvesen, Helga B., Achter, Viktor, Lang, Ulrich ORCID: 0000-0001-7166-0805, Bogus, Magdalena, Schneider, Peter M. ORCID: 0000-0003-0744-2349, Zander, Thomas, Ansen, Sascha, Hallek, Michael, Wolf, Juergen, Vingron, Martin, Yatabe, Yasushi ORCID: 0000-0003-1788-559X, Travis, William D., Nuernberg, Peter, Reinhardt, Christian, Perner, Sven, Heukamp, Lukas ORCID: 0000-0002-3388-3482, Buettner, Reinhard, Haas, Stefan A., Brambilla, Elisabeth, Peifer, Martin ORCID: 0000-0002-5243-5503, Sage, Julien and Thomas, Roman K. (2015). Comprehensive genomic profiles of small cell lung cancer. Nature, 524 (7563). S. 47 - 54. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4687

George, Julie, Walter, Vonn ORCID: 0000-0001-6114-6714, Peifer, Martin, Alexandrov, Ludmil B., Seidel, Danila ORCID: 0000-0003-4388-3117, Leenders, Frauke, Maas, Lukas, Mueller, Christian, Dahmen, Ilona, Delhomme, Tiffany M. ORCID: 0000-0003-0265-4246, Ardin, Maude, Leblay, Noemie, Byrnes, Graham ORCID: 0000-0003-3893-7539, Sun, Ruping, De Reynies, Aurelien, McLeer-Florin, Anne, Bosco, Graziella, Malchers, Florian, Menon, Roopika, Altmuller, Janine, Becker, Christian, Nurnberg, Peter, Achter, Viktor, Lang, Ulrich, Schneider, Peter M. ORCID: 0000-0003-0744-2349, Bogus, Magdalena, Soloway, Matthew G., Wilkerson, Matthew D., Cun, Yupeng ORCID: 0000-0002-4241-8099, McKay, James D., Moro-Sibilot, Denis, Brambilla, Christian G., Lantuejoul, Sylvie, Lemaitre, Nicolas, Soltermann, Alex, Weder, Walter, Tischler, Verena ORCID: 0000-0002-6673-8329, Brustugun, Odd Terje, Lund-Iversen, Marius, Helland, Aslaug ORCID: 0000-0002-5520-0275, Solberg, Steinar, Ansen, Sascha, Wright, Gavin, Solomon, Benjamin, Roz, Luca ORCID: 0000-0001-5817-7149, Pastorino, Ugo, Petersen, Iver, Clement, Joachim H. ORCID: 0000-0002-6601-2456, Saenger, Jorg, Wolf, Jurgen, Vingron, Martin, Zander, Thomas, Perner, Sven, Travis, William D., Haas, Stefan A., Olivier, Magali, Foll, Matthieu ORCID: 0000-0001-9006-8436, Buettner, Reinhard, Hayes, David Neil, Brambilla, Elisabeth, Fernandez-Cuesta, Lynnette ORCID: 0000-0002-0724-6703 and Thomas, Roman K. (2018). Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors. Nat. Commun., 9. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Grasse, Sabrina, Lienhard, Matthias, Frese, Steffen, Kerick, Martin ORCID: 0000-0002-6298-4514, Steinbach, Anne, Grimm, Christina ORCID: 0000-0002-4676-8870, Hussong, Michelle, Rolff, Jana, Becker, Michael, Dreher, Felix, Schirmer, Uwe, Boerno, Stefan, Ramisch, Anna, Leschber, Gunda, Timmermann, Bernd, Grohe, Christian, Lueders, Heike, Vingron, Martin, Fichtner, Iduna, Klein, Sebastian, Odenthal, Margarete, Buettner, Reinhard, Lehrach, Hans, Sueltmann, Holger, Herwig, Ralf and Schweiger, Michal R. (2018). Epigenomic profiling of non-small cell lung cancer xenografts uncover LRP12 DNA methylation as predictive biomarker for carboplatin resistance. Genome Med., 10. LONDON: BMC. ISSN 1756-994X