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2002
Pipenbacher, Peter, Schliep, Alexander, Schneckener, Sebastian, Schönhuth, Alexander, Schomburg, Dietmar and Schrader, Rainer (2002). ProClust: Improved clustering of protein sequences with an extended graph-based approach. Bioinformatics, 18 (Sup. 2). S182-S191. Oxford University Press.
2001
Bolten, Eva, Schliep, Alexander, Schneckener, Sebastian, Schomburg, Dietmar and Schrader, Rainer (2001). Clustering Protein Sequences - Structure Prediction by transitive homology. Bioinformatics, 17 (10). pp. 935-941. Oxford University Press.
Bolten, Eva, Schliep, Alexander, Schneckener, Sebastian, Schomburg, Dietmar and Schrader, Rainer (2001). Strongly Connected Components can Predict Protein Structure. Elsevier.
Schliep, Alexander (2001). A Bayesian Approach to Learning Hidden Markov Model Topology with Applications to Biological Sequence Analysis. PhD thesis, Universität zu Köln.