Universität zu Köln

2023

Wortel, Meike T., Agashe, Deepa ORCID: 0000-0002-0374-8159, Bailey, Susan F., Bank, Claudia ORCID: 0000-0003-4730-758X, Bisschop, Karen ORCID: 0000-0001-7083-2636, Blankers, Thomas ORCID: 0000-0002-1893-8537, Cairns, Johannes ORCID: 0000-0003-1329-2025, Colizzi, Enrico Sandro ORCID: 0000-0003-1709-4499, Cusseddu, Davide ORCID: 0000-0002-6882-9486, Desai, Michael M., van Dijk, Bram, Egas, Martijn ORCID: 0000-0001-8078-1609, Ellers, Jacintha, Groot, Astrid T., Heckel, David G., Johnson, Marcelle L., Kraaijeveld, Ken, Krug, Joachim, Laan, Liedewij, Laessig, Michael, Lind, Peter A., Meijer, Jeroen, Noble, Luke M., Okasha, Samir, Rainey, Paul B., Rozen, Daniel E., Shitut, Shraddha, Tans, Sander J., Tenaillon, Olivier, Teotonio, Henrique, de Visser, J. Arjan G. M., Visser, Marcel E., Vroomans, Renske M. A., Werner, Gijsbert D. A., Wertheim, Bregje and Pennings, Pleuni S. (2023). Towards evolutionary predictions: Current promises and challenges. Evol. Appl., 16 (1). S. 3 - 22. HOBOKEN: WILEY. ISSN 1752-4571

2022

Das, Suman G., Krug, Joachim and Mungan, Muhittin (2022). Driven Disordered Systems Approach to Biological Evolution in Changing Environments. Phys. Rev. X, 12 (3). COLLEGE PK: AMER PHYSICAL SOC. ISSN 2160-3308

Goertz, Maurice and Krug, Joachim (2022). Nonlinear dynamics of an epidemic compartment model with asymptomatic infections and mitigation. J. Phys. A-Math. Theor., 55 (41). BRISTOL: IOP Publishing Ltd. ISSN 1751-8121

Hinderhofer, Alexander, Hagenlocher, Jan, Gerlach, Alexander ORCID: 0000-0003-1787-1868, Krug, Joachim, Oettel, Martin ORCID: 0000-0002-1128-2045 and Schreiber, Frank ORCID: 0000-0003-3659-6718 (2022). Nonequilibrium Roughness Evolution of Small Molecule Mixed Films Reflecting Equilibrium Phase Behavior. J. Phys. Chem. C, 126 (27). S. 11348 - 11358. WASHINGTON: AMER CHEMICAL SOC. ISSN 1932-7455

Klug, Alexander ORCID: 0000-0002-5239-0405 and Krug, Joachim (2022). Conflicting effects of recombination on the evolvability and robustness in neutrally evolving populations. PLoS Comput. Biol., 18 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7358

Manrubia, Susanna ORCID: 0000-0003-0134-2785, Cuesta, Jose A., Aguirre, Jacobo, Ahnert, Sebastian E., Altenberg, Lee, Cano, Alejandro V., Catalan, Pablo ORCID: 0000-0003-2826-4684, Diaz-Uriarte, Ramon ORCID: 0000-0002-6637-9039, Elena, Santiago F., Garcia-Martin, Juan Antonio ORCID: 0000-0003-0993-4064, Hogeweg, Paulien, Khatri, Bhavin S., Krug, Joachim, Louis, Ard A., Martin, Nora S., Payne, Joshua L., Tarnowski, Matthew J. and Weiss, Marcel (2022). The long and winding road to understanding organismal construction Reply to comments on From genotypes to organisms: State-of-the-art and perspectives of a cornerstone in evolutionary dynamics comment. Phys. Life Rev., 42. S. 19 - 25. AMSTERDAM: ELSEVIER. ISSN 1873-1457

Saebelfeld, Manja, Das, Suman G., Hagenbeek, Arno, Krug, Joachim and de Visser, J. Arjan G. M. (2022). Stochastic establishment of beta-lactam-resistant Escherichia coli mutants reveals conditions for collective resistance. Proc. R. Soc. B-Biol. Sci., 289 (1974). LONDON: ROYAL SOC. ISSN 1471-2954

Schenk, Martijn F., Zwart, Mark P., Hwang, Sungmin, Ruelens, Philip, Severing, Edouard, Krug, Joachim and de Visser, J. Arjan G. M. (2022). Population size mediates the contribution of high-rate and large-benefit mutations to parallel evolution. Nat. Ecol. Evol., 6 (4). S. 439 - 457. BERLIN: NATURE PORTFOLIO. ISSN 2397-334X

2021

Josupeit, Mario and Krug, Joachim (2021). The fitness landscapes of translation. Physica A, 569. AMSTERDAM: ELSEVIER. ISSN 1873-2119

Manrubia, Susanna, Cuesta, Jose A., Aguirre, Jacobo, Ahnert, Sebastian E., Altenberg, Lee, V. Cano, Alejandro, Catalan, Pablo ORCID: 0000-0003-2826-4684, Diaz-Uriarte, Ramon, Elena, Santiago F., Garcia-Martin, Juan Antonio ORCID: 0000-0003-0993-4064, Hogeweg, Paulien, Khatri, Bhavin S., Krug, Joachim, Louis, Ard A., Martin, Nora S., Payne, Joshua L., Tarnowski, Matthew J. and Weiss, Marcel (2021). From genotypes to organisms: State-of-the-art and perspectives of a cornerstone in evolutionary dynamics. Phys. Life Rev., 38. S. 55 - 107. AMSTERDAM: ELSEVIER. ISSN 1873-1457

Saebelfeld, Manja, Das, Suman G., Brink, Jorn, Hagenbeek, Arno, Krug, Joachim and de Visser, J. Arjan G. M. (2021). Antibiotic Breakdown by Susceptible Bacteria Enhances the Establishment of beta-Lactam Resistant Mutants. Front. Microbiol., 12. LAUSANNE: FRONTIERS MEDIA SA. ISSN 1664-302X

2020

Das, Suman G., Direito, Susana O. L., Waclaw, Bartlomiej, Allen, Rosalind J. and Krug, Joachim ORCID: 0000-0002-2143-6490 (2020). Predictable properties of fitness landscapes induced by adaptational tradeoffs. eLife, 9. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD. ISSN 2050-084X

Park, Su-Chan, Hwang, Sungmin and Krug, Joachim ORCID: 0000-0002-2143-6490 (2020). Distribution of the number of fitness maxima in Fisher's geometric model. J. Phys. A-Math. Theor., 53 (38). BRISTOL: IOP PUBLISHING LTD. ISSN 1751-8121

2019

Klug, Alexander ORCID: 0000-0002-5239-0405, Park, Su-Chan and Krug, Joachim (2019). Recombination and mutational robustness in neutral fitness landscapes. PLoS Comput. Biol., 15 (8). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7358

Majumdar, Satya N., von Bomhard, Philipp and Krug, Joachim ORCID: 0000-0002-2143-6490 (2019). Exactly Solvable Record Model for Rainfall. Phys. Rev. Lett., 122 (15). COLLEGE PK: AMER PHYSICAL SOC. ISSN 1079-7114

Saberi, Abbas Ali, Dashti-Naserabadi, Hor and Krug, Joachim ORCID: 0000-0002-2143-6490 (2019). Competing Universalities in Kardar-Parisi-Zhang Growth Models. Phys. Rev. Lett., 122 (4). COLLEGE PK: AMER PHYSICAL SOC. ISSN 1079-7114

2018

Hwang, Sungmin, Schmiegelt, Benjamin, Ferretti, Luca ORCID: 0000-0001-7578-7301 and Krug, Joachim ORCID: 0000-0002-2143-6490 (2018). Universality Classes of Interaction Structures for NK Fitness Landscapes. J. Stat. Phys., 172 (1). S. 226 - 279. NEW YORK: SPRINGER. ISSN 1572-9613

Nowak, Stefan, Neidhart, Johannes, Szendro, Ivan G., Rzezonka, Jonas, Marathe, Rahul and Krug, Joachim ORCID: 0000-0002-2143-6490 (2018). Interaction Analysis of Longevity Interventions Using Survival Curves. Biology-Basel, 7 (1). BASEL: MDPI. ISSN 2079-7737

Park, Su-Chan, Klatt, Philipp and Krug, Joachim ORCID: 0000-0002-2143-6490 (2018). Rare beneficial mutations cannot halt Muller's ratchet in spatial populations. EPL, 123 (4). BRISTOL: IOP PUBLISHING LTD. ISSN 1286-4854

Zwart, Mark P., Schenk, Martijn F., Hwang, Sungmin, Koopmanschap, Bertha, de lange, Niek, de Pol, Lion van, Szendro, Ivan G., Krug, Joachim ORCID: 0000-0002-2143-6490 and de Visser, J. Arjan G. M. (2018). Unraveling the causes of adaptive benefits of synonymous mutations in TEM-1 beta-lactamase. Heredity, 121 (5). S. 406 - 422. LONDON: NATURE PUBLISHING GROUP. ISSN 1365-2540

2017

Hwang, Sungmin, Park, Su-Chan and Krug, Joachim ORCID: 0000-0002-2143-6490 (2017). Genotypic Complexity of Fisher's Geometric Model. Genetics, 206 (2). S. 1049 - 1080. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

van Dijk, Thomas ORCID: 0000-0001-9063-4338, Hwang, Sungmin, Krug, Joachim ORCID: 0000-0002-2143-6490, de Visser, J. Arjan G. M. and Zwart, Mark P. (2017). Mutation supply and the repeatability of selection for antibiotic resistance. Phys. Biol., 14 (5). BRISTOL: IOP PUBLISHING LTD. ISSN 1478-3975

2016

Karalus, Steffen and Krug, Joachim ORCID: 0000-0002-2143-6490 (2016). Reconstruction of evolved dynamic networks from degree correlations. Phys. Rev. E, 93 (6). COLLEGE PK: AMER PHYSICAL SOC. ISSN 1550-2376

Krug, Joachim ORCID: 0000-0002-2143-6490 (2016). Nonequilibrium stationary states as products of matrices. J. Phys. A-Math. Theor., 49 (42). BRISTOL: IOP PUBLISHING LTD. ISSN 1751-8121

Park, Su-Chan and Krug, Joachim ORCID: 0000-0002-2143-6490 (2016). delta-exceedance records and random adaptive walks. J. Phys. A-Math. Theor., 49 (31). BRISTOL: IOP PUBLISHING LTD. ISSN 1751-8121

Park, Su-Chan ORCID: 0000-0002-0890-8879, Neidhart, Johannes and Krug, Joachim ORCID: 0000-0002-2143-6490 (2016). Greedy adaptive walks on a correlated fitness landscape. J. Theor. Biol., 397. S. 89 - 103. LONDON: ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD. ISSN 1095-8541

Schoustra, Sijmen, Hwang, Sungmin, Krug, Joachim ORCID: 0000-0002-2143-6490 and de Visser, J. Arjan G. M. (2016). Diminishing-returns epistasis among random beneficial mutations in a multicellular fungus. Proc. R. Soc. B-Biol. Sci., 283 (1837). LONDON: ROYAL SOC. ISSN 1471-2954

2015

Karalus, Steffen and Krug, Joachim ORCID: 0000-0002-2143-6490 (2015). Symmetry-based coarse-graining of evolved dynamical networks. EPL, 111 (3). MULHOUSE: EPL ASSOCIATION, EUROPEAN PHYSICAL SOCIETY. ISSN 1286-4854

Nowak, Stefan and Krug, Joachim ORCID: 0000-0002-2143-6490 (2015). Analysis of adaptive walks on NK fitness landscapes with different interaction schemes. J. Stat. Mech.-Theory Exp.. BRISTOL: IOP PUBLISHING LTD. ISSN 1742-5468

Schenk, Martijn F., Witte, Sariette, Salverda, Merijn L. M., Koopmanschap, Bertha, Krug, Joachim ORCID: 0000-0002-2143-6490 and de Visser, J. Arjan G. M. (2015). Role of pleiotropy during adaptation of TEM-1 beta-lactamase to two novel antibiotics. Evol. Appl., 8 (3). S. 248 - 261. HOBOKEN: WILEY. ISSN 1752-4571

Schenk, Martijn F., Witte, Sariette, Salverda, Merijn L. M., Koopmanschap, Bertha, Krug, Joachim ORCID: 0000-0002-2143-6490 and de Visser, J. Arjan G. M. (2015). Role of pleiotropy during adaptation of TEM-1 beta-lactamase to two novel antibiotics. Evol. Appl., 8 (3). S. 248 - 261. HOBOKEN: WILEY. ISSN 1752-4571

2014

Neidhart, Johannes, Szendro, Ivan G. and Krug, Joachim ORCID: 0000-0002-2143-6490 (2014). Adaptation in Tunably Rugged Fitness Landscapes: The Rough Mount Fuji Model. Genetics, 198 (2). S. 699 - 722. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Nowak, Stefan, Neidhart, Johannes, Szendro, Ivan G. and Krug, Joachim ORCID: 0000-0002-2143-6490 (2014). Multidimensional Epistasis and the Transitory Advantage of Sex. PLoS Comput. Biol., 10 (9). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7358

Otwinowski, Jakub ORCID: 0000-0002-0341-8790 and Krug, Joachim ORCID: 0000-0002-2143-6490 (2014). Clonal interference and Muller's ratchet in spatial habitats. Phys. Biol., 11 (5). BRISTOL: IOP PUBLISHING LTD. ISSN 1478-3975

de Visser, J. Arjan G. M. and Krug, Joachim ORCID: 0000-0002-2143-6490 (2014). Empirical fitness landscapes and the predictability of evolution. Nat. Rev. Genet., 15 (7). S. 480 - 491. LONDON: NATURE PUBLISHING GROUP. ISSN 1471-0064

2013

Neidhart, Johannes, Szendro, Ivan G. and Krug, Joachim ORCID: 0000-0002-2143-6490 (2013). Exact results for amplitude spectra of fitness landscapes. J. Theor. Biol., 332. S. 218 - 228. LONDON: ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD. ISSN 1095-8541

Park, Su-Chan and Krug, Joachim ORCID: 0000-0002-2143-6490 (2013). Rate of Adaptation in Sexuals and Asexuals: A Solvable Model of the Fisher-Muller Effect. Genetics, 195 (3). S. 941 - 958. BETHESDA: GENETICS SOC AM. ISSN 1943-2631

2011

Neidhart, Johannes and Krug, Joachim ORCID: 0000-0002-2143-6490 (2011). Adaptive Walks and Extreme Value Theory. Phys. Rev. Lett., 107 (17). COLLEGE PK: AMER PHYSICAL SOC. ISSN 1079-7114

Wergen, Gregor, Franke, Jasper and Krug, Joachim ORCID: 0000-0002-2143-6490 (2011). Correlations Between Record Events in Sequences of Random Variables with a Linear Trend. J. Stat. Phys., 144 (6). S. 1206 - 1223. NEW YORK: SPRINGER. ISSN 1572-9613

Wergen, Gregor, Franke, Jasper and Krug, Joachim ORCID: 0000-0002-2143-6490 (2011). Correlations Between Record Events in Sequences of Random Variables with a Linear Trend (vol 144, pg 1206, 2011). J. Stat. Phys., 145 (5). S. 1405 - 1407. NEW YORK: SPRINGER. ISSN 0022-4715

Wolff, Andrea, Lohmar, Ingo, Krug, Joachim ORCID: 0000-0002-2143-6490 and Biham, Ofer (2011). Diffusion-limited reactions on disordered surfaces with continuous distributions of binding energies. J. Stat. Mech.-Theory Exp.. BRISTOL: IOP PUBLISHING LTD. ISSN 1742-5468

2010

Franke, Jasper, Wergen, Gregor and Krug, Joachim ORCID: 0000-0002-2143-6490 (2010). Records and sequences of records from random variables with a linear trend. J. Stat. Mech.-Theory Exp.. BRISTOL: IOP PUBLISHING LTD. ISSN 1742-5468

Kriecherbauer, Thomas and Krug, Joachim ORCID: 0000-0002-2143-6490 (2010). A pedestrian's view on interacting particle systems, KPZ universality and random matrices. J. Phys. A-Math. Theor., 43 (40). BRISTOL: IOP PUBLISHING LTD. ISSN 1751-8121