Universität zu Köln

Journal Article

Dewald, Felix, Suarez, Isabelle, Johnen, Ronja ORCID: 0000-0002-5150-5266, Grossbach, Jan ORCID: 0000-0002-9394-5665, Moran-Tovar, Roberto ORCID: 0000-0002-6291-9376, Steger, Gertrud, Joachim, Alexander, Rubio, Gibran Horemheb, Fries, Mira, Behr, Florian, Kley, Joao, Lingnau, Andreas, Kretschmer, Alina, Gude, Carina, Beazes-Flores, Guadelupe, del Valle, David Laveaga, Roblero-Hernandez, Alberto, Magana-Cerino, Jesus, Hernandez, Adriana Torres, Ruiz-Quinones, Jesus, Schega, Konstantin, Linne, Viktoria, Junker, Lena, Wunsch, Marie ORCID: 0000-0002-6570-1831, Heger, Eva, Knops, Elena, Di Cristanziano, Veronica, Meyer, Meike ORCID: 0000-0002-5708-3981, Huenseler, Christoph, Weber, Lutz T., Lueers, Jan-Christoffer, Quade, Gustav, Wisplinghoff, Hilmar, Tiemann, Carsten, Zotz, Rainer, Jomaa, Hassan, Pranada, Arthur, Herzum, Ileana, Cullen, Paul, Schmitz, Franz-Josef, Philipsen, Paul, Kirchner, Georg, Knabbe, Cornelius, Hellmich, Martin, Buess, Michael, Wolff, Anna, Kossow, Annelene, Niessen, Johannes, Jeworutzki, Sebastian ORCID: 0000-0002-2671-5253, Schraepler, Joerg-Peter, Laessig, Michael, Doetsch, Joerg, Faetkenheuer, Gerd, Kaiser, Rolf ORCID: 0000-0002-2640-2548, Beyer, Andreas, Rybniker, Jan and Klein, Florian ORCID: 0000-0003-1376-1792 (2022). Effective high-throughput RT-qPCR screening for SARS-CoV-2 infections in children. Nat. Commun., 13 (1). BERLIN: NATURE PORTFOLIO. ISSN 2041-1723

Frazao, Nelson ORCID: 0000-0003-3509-8338, Sousa, Ana, Laessig, Michael and Gordo, Isabel ORCID: 0000-0003-1622-5143 (2019). Horizontal gene transfer overrides mutation in Escherichia coli colonizing the mammalian gut. Proc. Natl. Acad. Sci. U. S. A., 116 (36). S. 17906 - 17916. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Hagai, Tzachi, Chen, Xi ORCID: 0000-0003-2648-3146, Miragaia, Ricardo J., Rostom, Raghd, Gomes, Tomas, Kunowska, Natalia, Henriksson, Johan, Park, Jong-Eun, Proserpio, Valentina ORCID: 0000-0003-2071-4206, Donati, Giacomo, Bossini-Castillo, Lara ORCID: 0000-0002-5471-5824, Braga, Felipe A. Vieira, Naamati, Guy ORCID: 0000-0002-0523-4071, Fletcher, James, Stephenson, Emily, Vegh, Peter ORCID: 0000-0002-0133-3240, Trynka, Gosia, Kondova, Ivanela, Dennis, Mike, Haniffa, Muzlifah, Nourmohammad, Armita, Laessig, Michael and Teichmann, Sarah A. (2018). Gene expression variability across cells and species shapes innate immunity. Nature, 563 (7730). S. 197 - 217. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4687

Held, Torsten ORCID: 0000-0002-1131-1950, Klemmer, Daniel and Laessig, Michael (2019). Survival of the simplest in microbial evolution. Nat. Commun., 10. LONDON: NATURE PUBLISHING GROUP. ISSN 2041-1723

Held, Torsten ORCID: 0000-0002-1131-1950, Nourmohammad, Armita and Laessig, Michael (2014). Adaptive evolution of molecular phenotypes. J. Stat. Mech.-Theory Exp.. BRISTOL: IOP PUBLISHING LTD. ISSN 1742-5468

Kolar, Michal ORCID: 0000-0002-4593-1525, Meier, Joern, Mustonen, Ville ORCID: 0000-0002-7270-1792, Laessig, Michael and Berg, Johannes (2012). GraphAlignment: Bayesian pairwise alignment of biological networks. BMC Syst. Biol., 6. LONDON: BMC. ISSN 1752-0509

Laessig, Michael and Luksza, Marta (2014). ADAPTIVE EVOLUTION Can we read the future from a tree? eLife, 3. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD. ISSN 2050-084X

Laessig, Michael and Mustonen, Ville ORCID: 0000-0002-7270-1792 (2020). Eco-evolutionary control of pathogens. Proc. Natl. Acad. Sci. U. S. A., 117 (33). S. 19694 - 19705. WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Laessig, Michael, Mustonen, Ville ORCID: 0000-0002-7270-1792 and Walczak, Aleksandra M. (2017). Predicting evolution. Nat. Ecol. Evol., 1 (3). LONDON: NATURE PUBLISHING GROUP. ISSN 2397-334X

Luksza, Marta and Laessig, Michael (2014). A predictive fitness model for influenza. Nature, 507 (7490). S. 57 - 76. LONDON: NATURE PUBLISHING GROUP. ISSN 1476-4687

Luksza, Marta ORCID: 0000-0002-9520-1299, Laessig, Michael and Berg, Johannes (2010). Significance Analysis and Statistical Mechanics: An Application to Clustering. Phys. Rev. Lett., 105 (22). COLLEGE PK: AMER PHYSICAL SOC. ISSN 0031-9007

Marchi, Jacopo, Laessig, Michael, Mora, Thierry and Walczak, Aleksandra M. (2019). Multi-Lineage Evolution in Viral Populations Driven by Host Immune Systems. Pathogens, 8 (3). BASEL: MDPI. ISSN 2076-0817

Marchi, Jacopo, Laessig, Michael, Walczak, Aleksandra M. and Mora, Thierry (2021). Antigenic waves of virus-immune coevolution. Proc. Natl. Acad. Sci. U. S. A., 118 (27). WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Meijers, Matthijs ORCID: 0000-0002-1876-8064, Vanshylla, Kanika ORCID: 0000-0003-4552-9170, Gruell, Henning, Klein, Florian and Laessig, Michael (2021). Predicting in vivo escape dynamics of HIV-1 from a broadly neutralizing antibody. Proc. Natl. Acad. Sci. U. S. A., 118 (30). WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Moran-Tovar, Roberto ORCID: 0000-0002-6291-9376, Gruell, Henning, Klein, Florian ORCID: 0000-0003-1376-1792 and Laessig, Michael (2022). Stochasticity of infectious outbreaks and consequences for optimal interventions. J. Phys. A-Math. Theor., 55 (38). BRISTOL: IOP Publishing Ltd. ISSN 1751-8121

Morris, Dylan H., Gostic, Katelyn M., Pompei, Simone, Bedford, Trevor, Luksza, Marta, Neher, Richard A., Grenfell, Bryan T., Laessig, Michael and McCauley, John W. (2018). Predictive Modeling of Influenza Shows the Promise of Applied Evolutionary Biology. Trends Microbiol., 26 (2). S. 102 - 119. OXFORD: ELSEVIER SCI LTD. ISSN 1878-4380

Nourmohammad, Armita, Held, Torsten ORCID: 0000-0002-1131-1950 and Laessig, Michael (2013). Universality and predictability in molecular quantitative genetics. Curr. Opin. Genet. Dev., 23 (6). S. 684 - 694. LONDON: CURRENT BIOLOGY LTD. ISSN 1879-0380

Nourmohammad, Armita and Laessig, Michael (2011). Formation of Regulatory Modules by Local Sequence Duplication. PLoS Comput. Biol., 7 (10). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7358

Pinheiro, Fernanda ORCID: 0000-0002-0132-0562, Warsi, Omar ORCID: 0000-0003-3175-1184, Andersson, Dan I. and Laessig, Michael (2021). Metabolic fitness landscapes predict the evolution of antibiotic resistance. Nat. Ecol. Evol., 5 (5). S. 677 - 696. BERLIN: NATURE PORTFOLIO. ISSN 2397-334X

Power, Jeffrey J., Pinheiro, Fernanda ORCID: 0000-0002-0132-0562, Pompei, Simone, Kovacova, Viera ORCID: 0000-0003-4581-4254, Yueksel, Melih, Rathmann, Isabel ORCID: 0000-0003-0596-9630, Foerster, Mona, Laessig, Michael and Maier, Berenike ORCID: 0000-0001-6971-9927 (2021). Adaptive evolution of hybrid bacteria by horizontal gene transfer. Proc. Natl. Acad. Sci. U. S. A., 118 (10). WASHINGTON: NATL ACAD SCIENCES. ISSN 0027-8424

Riedel, Nico ORCID: 0000-0002-3808-1163, Khatri, Bhavin S., Laessig, Michael and Berg, Johannes (2015). Multiple-Line Inference of Selection on Quantitative Traits. Genetics, 201 (1). S. 305 - 323. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Schiffels, Stephan ORCID: 0000-0002-1017-9150, Szoellosi, Gergely J., Mustonen, Ville ORCID: 0000-0002-7270-1792 and Laessig, Michael (2011). Emergent Neutrality in Adaptive Asexual Evolution. Genetics, 189 (4). S. 1361 - 1390. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Strelkowa, Natalja and Laessig, Michael (2012). Clonal Interference in the Evolution of Influenza. Genetics, 192 (2). S. 671 - 701. BETHESDA: GENETICS SOCIETY AMERICA. ISSN 1943-2631

Vanshylla, Kanika ORCID: 0000-0003-4552-9170, Fan, Chengcheng ORCID: 0000-0003-4213-5758, Wunsch, Marie ORCID: 0000-0002-6570-1831, Poopalasingam, Nareshkumar ORCID: 0000-0002-4981-6209, Meijers, Matthijs ORCID: 0000-0002-1876-8064, Kreer, Christoph ORCID: 0000-0002-9140-9850, Kleipass, Franziska ORCID: 0009-0003-7120-6620, Ruchnewitz, Denis ORCID: 0000-0001-5740-6958, Ercanoglu, Meryem S., Gruell, Henning, Muenn, Friederike, Pohl, Kai, Janicki, Hanna, Nolden, Tobias ORCID: 0000-0002-8996-5612, Bartl, Simone, Stein, Saskia C., Augustin, Max, Dewald, Felix, Gieselmann, Lutz, Schommers, Philipp, Schulz, Thomas F., Sander, Leif Erik, Koch, Manuel ORCID: 0000-0002-2962-7814, Luksza, Marta, Laessig, Michael, Bjorkman, Pamela J. and Klein, Florian ORCID: 0000-0003-1376-1792 (2022). Discovery of ultrapotent broadly neutralizing antibodies from SARS-CoV-2 elite neutralizers. Cell Host Microbe, 30 (1). S. 69 - 94. CAMBRIDGE: CELL PRESS. ISSN 1934-6069

Villa, Mara ORCID: 0000-0003-2543-027X and Laessig, Michael (2017). Fitness cost of reassortment in human influenza. PLoS Pathog., 13 (11). SAN FRANCISCO: PUBLIC LIBRARY SCIENCE. ISSN 1553-7374

Wortel, Meike T., Agashe, Deepa ORCID: 0000-0002-0374-8159, Bailey, Susan F., Bank, Claudia ORCID: 0000-0003-4730-758X, Bisschop, Karen ORCID: 0000-0001-7083-2636, Blankers, Thomas ORCID: 0000-0002-1893-8537, Cairns, Johannes ORCID: 0000-0003-1329-2025, Colizzi, Enrico Sandro ORCID: 0000-0003-1709-4499, Cusseddu, Davide ORCID: 0000-0002-6882-9486, Desai, Michael M., van Dijk, Bram, Egas, Martijn ORCID: 0000-0001-8078-1609, Ellers, Jacintha, Groot, Astrid T., Heckel, David G., Johnson, Marcelle L., Kraaijeveld, Ken, Krug, Joachim, Laan, Liedewij, Laessig, Michael, Lind, Peter A., Meijer, Jeroen, Noble, Luke M., Okasha, Samir, Rainey, Paul B., Rozen, Daniel E., Shitut, Shraddha, Tans, Sander J., Tenaillon, Olivier, Teotonio, Henrique, de Visser, J. Arjan G. M., Visser, Marcel E., Vroomans, Renske M. A., Werner, Gijsbert D. A., Wertheim, Bregje and Pennings, Pleuni S. (2023). Towards evolutionary predictions: Current promises and challenges. Evol. Appl., 16 (1). S. 3 - 22. HOBOKEN: WILEY. ISSN 1752-4571